Natronococcus occultus: Natoc_0536
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Entry
Natoc_0536 CDS
T02426
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nou
Natronococcus occultus
Brite
KEGG Orthology (KO) [BR:
nou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nou03032
]
Natoc_0536
03400 DNA repair and recombination proteins [BR:
nou03400
]
Natoc_0536
Enzymes [BR:
nou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Natoc_0536
DNA replication proteins [BR:
nou03032
]
Prokaryotic type
DNA Topoisomerases
Natoc_0536
DNA repair and recombination proteins [BR:
nou03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Natoc_0536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HHH_5
DNA_pol_lambd_f
Cdd1
HHH
DUF4332
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AGB36398
UniProt:
L0JX19
LinkDB
All DBs
Position
516023..518551
Genome browser
AA seq
842 aa
AA seq
DB search
MELIITEKDNAARRIADILSGGSYDSTRENGVNVYEWGGKRCVGLSGHVVGVDFPSEYSD
WRDVEPVELIDADIEKTATKENIVATLRILARRAERVAIATDYDREGELIGKEAYDIVRE
VDEDVPIRRVRFSSITENEVKNAFDEPDELDFDLAAAGEARQIIDLIWGAALTRFLSLSA
GQLGNDFISVGRVQSPTLKLIVDREREIQAFDPETYWELFADLRQAETTFEAQYFYRDED
DNEAERVWKEARADEVYETLSGRNAATVVDVNRRTRTDAPPAPFNTTQFIRAASAIGYSA
KRAMSIAEDLYTAGYITYPRTDNTVYPDDLDPEELLEEFVGHSTLGDAADSLLEADEIRA
TEGDEETTDHPPIHPTGEIPTRGGDVSDDEWEIYELVVRRFYATVADPAKWEHLKVVAEV
DDVRLKANGKRLVEPGYHDVYPYFNTTENYVPDVETGEELSIEDVELEEKETQPPRRYGQ
SRLIETMEDLGLGTKSTRHNTIEKLYDRGYIESDPPRPTKLAMAVVDAAESYADRVVSEE
MTAQLEQDMDAIASGEAGLEDVTDESREMLEEIFANLAESREEIGDHLRKSLKDDKRLGP
CPECGEDLLVRQSRHGSYFIGCDGYPDCENTLPLPSTGKPLIMDGECDEHGLNEVKMLAG
RQTFVHGCPLCTADEAGEGEILGDCPDCGEGATSPTSRGEGGETAEADGELVIKTLQSGS
RLVGCTRYPDCEYSLPLPRRGEIEVTDERCEEHDLPELLVHSGDEPWELGCPICNYREFQ
AREADSGSDLESLDGVGAKTAEKLVDAGIESLEDLTDADPDAVAEDVDGVSADRVRSWQA
EA
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
gtggaactgatcatcaccgagaaggacaacgccgcgcgacggatcgccgacatcctttcc
ggcggtagctatgattcgacgcgcgagaacggtgtcaacgtctacgagtggggcggcaag
cgctgcgtgggtctgtcgggccacgtcgtcggggtcgacttcccctcggagtactccgac
tggcgggacgtcgagcccgtcgagctcatcgacgcggatatcgagaagaccgcgacgaaa
gaaaacatcgtcgccacgctgcggatcctcgcccgccgggccgaacgggttgcgatcgcg
accgactacgaccgcgagggcgaactcatcgggaaggaggcctacgacatcgtccgcgag
gtcgacgaggacgtccctatccgtcgggtgcgcttttcctcgatcaccgaaaacgaggtc
aaaaacgccttcgacgagcccgacgagctggacttcgatctggccgcggcgggcgaggcc
cgccagatcatcgacctgatctggggcgccgcgctcacccgattcctctcgctgtcggcg
ggccagctcggcaacgacttcatctcggtcggacgggtccagtcgccgacgctgaagctg
atcgtcgaccgcgagcgggagatccaggcgttcgatccggagacgtactgggagcttttt
gccgacctccgacaggcggagacgacgttcgaggcccagtacttctaccgcgacgaggac
gacaacgaggccgagcgcgtctggaaggaggcccgcgccgacgaggtctacgagaccctg
tcgggtcgcaacgccgcgacggtcgtcgacgtcaatcgccgtacccggaccgacgcgccg
cccgcgccgtttaacacgacccagttcatccgcgcggccagcgcgatcggctactcggcc
aagcgggcgatgtcgatcgccgaggacctctacaccgccggctacattacctatccgcgg
accgacaacaccgtctaccccgacgacctcgatcccgaggagctgctcgaggagttcgtc
ggccactcgacgctcggcgacgcggccgactcgctgctcgaggccgacgagatccgggcc
accgaaggtgacgaggagacgaccgaccacccgccgatccacccgacgggcgagatcccg
acccggggcggcgacgtcagcgacgacgagtgggagatctacgagctggtcgtgcgccgg
ttctacgcgaccgtcgccgatcccgcgaagtgggaacacctcaaggtcgtcgccgaggtc
gacgacgtccgcttgaaggcaaacggcaagcgcctcgtcgagccgggctaccacgacgtc
tacccgtacttcaacacgaccgagaactacgtccccgacgtcgagaccggcgaggagctt
tcgatcgaggacgtcgagctcgaggagaaggagacacagccgccccgtcggtacggccag
tcgcgtctcatcgagaccatggaggatctcggcctggggacaaaaagcacacggcacaac
actattgaaaaattatacgaccggggctacatcgagagcgatccgccccgtccgaccaag
ctggcgatggcggtcgtcgacgccgccgagagctacgccgaccgggtcgtcagcgaggag
atgacggcccagctggaacaggatatggacgccatcgcctccggcgaggccggtctcgag
gacgtcaccgacgaatctcgagagatgctcgaggagatcttcgcgaacctggccgagtcc
cgggaggagatcggcgaccacctccggaagtcgctgaaagacgacaagcgcctcggtccc
tgtccggagtgtggcgaggacttgctcgtccgtcagagccgccacggctcctacttcatc
ggctgtgacggctacccggactgcgagaacacgctgccgctgccctcgacgggcaagccg
ctgatcatggacggcgagtgcgacgagcacgggctcaacgaggtgaagatgctcgccggc
cgccagacgttcgtccacggctgtccgctgtgtacagccgacgaggcgggtgagggcgag
atcctgggcgactgtccggactgtggggagggcgcgacgtctccgacgtcgcgaggcgaa
ggcggtgaaaccgccgaagcggacggggaactcgtaatcaagactctccagagcggctcc
cggctggtcggctgtacgcgctatccggactgcgagtactcgctgccgctaccccggcgc
ggcgagatcgaagtcaccgacgagcgctgcgaagaacacgacctacccgaactgctcgtc
cacagcggcgacgagccctgggagctcggctgtccgatctgtaactaccgcgagttccag
gcccgggaggcagacagcggttcggacctcgagagcctcgacggcgtcggcgccaagacc
gccgagaagctcgtcgacgcgggcatcgagagcctcgaggacctgaccgacgccgacccc
gacgcggtcgccgaggacgtcgacggtgtcagcgccgatcgggtccgcagctggcaggcc
gaggcgtag
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