Natronococcus occultus: Natoc_0622
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Entry
Natoc_0622 CDS
T02426
Name
(GenBank) transcription initiation factor TFIIIB, Brf1 subunit/transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
nou
Natronococcus occultus
Pathway
nou03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nou00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Natoc_0622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nou03021
]
Natoc_0622
Transcription machinery [BR:
nou03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Natoc_0622
Prokaryotic type
Archaeal type
TFB
Natoc_0622
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
A2L_zn_ribbon
DZR_2
DUF5817
DUF7560
Zn_ribbon_LysW
Zn_ribbon_19
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AGB36482
UniProt:
L0JU00
LinkDB
All DBs
Position
605031..606011
Genome browser
AA seq
326 aa
AA seq
DB search
MTNASPNTRVRRSEHETNEETTESEDSDVVCPECAGQLVVDDEHGETVCEDCGLVVEEDS
VDRGPEWRAFDATEKNEKSRVGAPTTNTMHDKGLSTNIDWRNKDAYGNSLGSRQREKMQR
LRKWNERFRTRDSKERNLKQALGEIDRMASALGLPTNVRETASVIYRRALEEDLLPGRSI
EGVSTACVYAAARQAGVPRSLDEIADVSRVEKNEIARTYRYVVRELGLEVQPADPESYVP
RFASGLELSDEAEHRARGLLQNAKEKGVHSGKSPVGLAAAAVYAAALLTNEKTTQAAVSD
VADISEVTIRNRYHELLEAEETLGMA
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgactaacgcatcaccgaacacgagagtccgacgtagcgaacacgaaaccaacgaggag
acgaccgagagcgaggacagcgacgtcgtctgtcccgagtgtgccggccagctcgtcgtc
gacgacgagcacggcgagaccgtctgtgaggattgtggcctcgtcgtcgaggaagactcc
gtcgaccgaggacccgagtggcgcgccttcgacgccaccgagaaaaacgagaagtcccgc
gtcggcgcgccgacgacgaacacgatgcacgacaaggggctgtcgacgaacatcgactgg
cgcaacaaggacgcctacggcaactcgctgggctcgcgccagcgcgagaagatgcagcgc
ctgcgcaagtggaacgagcggttccgcacccgcgactccaaggaacgcaacctcaagcag
gcgcttggcgagatcgaccgcatggcgtcggcgctggggctgccgacgaacgttcgcgag
actgcaagcgtgatctaccggcgggctctcgaggaggacctgctgcccggtcgatcgatc
gagggcgtctcgacggcctgcgtctacgccgccgcccgacaggccggcgttccgcgctcg
ctcgacgagatcgccgacgtctcccgcgtcgagaaaaacgagatcgcccgcacctaccgc
tacgtcgtccgcgagctcggtctcgaggtccagcccgccgaccccgagagctacgtcccc
cgtttcgcgtcgggactcgaactctccgacgaggccgaacaccgcgcgcgcggactgctc
cagaacgccaaggagaaaggcgttcactcggggaagtcgcccgtcggcctcgcggccgcc
gcagtgtacgccgctgcactgctcaccaacgagaagacgacccaggccgcggtgagcgat
gtcgccgacatctccgaagttaccatccggaatcggtaccacgagctgctcgaggccgag
gaaaccctcgggatggcctga
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integrated database retrieval system
