Natronococcus occultus: Natoc_1339
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Entry
Natoc_1339 CDS
T02426
Name
(GenBank) PAS domain S-box
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
nou
Natronococcus occultus
Brite
KEGG Orthology (KO) [BR:
nou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nou03000
]
Natoc_1339
Transcription factors [BR:
nou03000
]
Prokaryotic type
Helix-turn-helix
Other families
Natoc_1339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
PAS_4
HTH_10
PAS_9
GAF_2
PAS
PAS_8
GAF
HTH_20
PAS_7
HTH_24
HTH_30
DUF7342
HTH_5
TrmB
Motif
Other DBs
NCBI-ProteinID:
AGB37153
UniProt:
L0JZ50
LinkDB
All DBs
Position
complement(1306039..1308240)
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AA seq
733 aa
AA seq
DB search
MDGTEEHEPMDELTDALRETLAVFDGSGEPRTTTEVAERLELGRRSVYARLERLAERDQL
RTKRVGASARVWWLPPEGDSTEAAGDRQRHGTPRSGLEAEIKRISDGFFAVDDEWRLSYY
NDVAAEMIDEDVADPLGARLWDVAPGLVDTPFETTYRTAMKRQKPNSVEAYFPPLEGWYR
DIVHPSKSGLSVYFTDITERKIRERTLERYERIVETVDDGIYVLDGDGRFAFVNDTFASM
TGYDRDELLGARATLVFDERSRTPRSELDAGSRRVAVTEESLYGADGESVPVESRLDRLE
LANGEAGRVGVVRDVTDRVEDERELERQREQLAAVTSLGEVANGIVHAIIGQPTREDVET
TVCEHLADSESYLFAWIGDVGAATRTVNVRAEAGVEGYLDDVTISVDPDDERSWGPTGRA
LRRGEVQTMQRLGDEPRYDPWRDRARDYGVRSSAAIPITHEGALYGVLNVYAERPNAFEG
PEGHRITQLGDIIGHAIAATERKRALLGDDLVELEFWIRDVGSAFDVPTETAGTITFDHT
IPIGDGELLVYGTATPDAIETVRGLAGALPGPTDITLHTEATPTGFELRVTDPPILSAVA
SRNGYVDDAVIEDGDYRVTIHLAPSVDVQRVVETVESASPDAELRCHRQIIRPADDPRPI
QRRLAADLTDRQHAVLSAAYYAGFFEWPRETSGTELAESLDIAPPTLHQHLRTAELKVLE
SLFSAPEEPANRS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggacgggaccgaggaacacgaaccgatggacgaactgaccgacgcgttacgggagacg
cttgcggtcttcgacggctcgggcgagccacgaacgacgacggaggtggccgaacggctg
gagttgggccgacgaagcgtgtacgcccgactggagcgactcgccgagcgagaccaactc
cggacgaaacgcgtcggtgcgagcgcccgggtctggtggctgccgcccgaaggcgacagt
accgaggcggccggggaccgtcaacgacacggcactccccgatccgggctcgaagcagag
atcaaacggatcagcgacgggttcttcgcggtcgacgacgagtggcggctcagctactac
aatgacgtcgccgcggagatgatcgacgaggacgtggcggatccgctgggagcgcggctg
tgggacgtcgcccccgggttggtcgacacgccgttcgagacgacctaccgaacggcgatg
aaacgccagaaacccaactccgtcgaggcctacttcccgccgctggaggggtggtatcgg
gacatcgtccacccctccaaatccggactctcggtctactttaccgacatcacggaacgg
aagatccgcgagcgaacgctcgaacggtacgaacggatcgtcgaaaccgtcgacgacggg
atctacgtcctcgacggagacgggcggttcgcgttcgtcaacgacacgttcgcttcgatg
accggatacgaccgtgacgaactgcttggagctcgcgcgaccctcgtgttcgacgaacgg
tctcggacgccgcgctccgaactcgacgcggggagtcgacgcgtcgccgttaccgaggag
tcgctgtacggcgccgacggagagtcggttcccgtcgagagccgtctcgatcggctcgag
cttgcgaacggcgaagccggacgggtcggcgtcgttcgcgacgtcaccgaccgtgttgag
gacgagcgcgaactcgagcgccagcgcgagcagctcgcggcggtgacgagtctgggcgag
gtcgcaaacgggatcgtccacgccatcatcggtcagccgactcgcgaggacgtcgaaacg
acggtctgtgaacacctcgcagactcggagtcgtacctgttcgcctggatcggcgacgtc
ggcgccgcgactcggacggtgaacgtccgggccgaagccggggtcgaggggtatctcgac
gacgtcacgatctcggtcgatccggacgacgagcgaagctgggggccgaccggtcgagcg
ctccgtcggggcgaggtccagacgatgcagcggctcggagacgagccccggtacgacccc
tggcgggaccgagccagggactacggggttcggtcgtccgcggcgatcccgatcactcac
gaaggtgcactctacggcgtgttgaacgtttacgccgaacggccgaacgccttcgaagga
cccgaagggcaccgaattacgcagctcggcgacatcatcggtcacgcgatcgccgccacc
gaacgcaagcgtgcgttgcttggcgacgacctcgtcgagctcgagttctggatccgggac
gtcggttcggcgttcgacgttccgaccgagacggcaggaacgatcaccttcgaccacacg
atcccgatcggtgacggcgagcttctcgtctacggaaccgcgacgccggacgcgatcgaa
accgtccgcgggctcgccggggcgctacccgggccgacggacatcacgctccacacggag
gcgacgccgacaggattcgagctccgggtgaccgatcccccgatactgtcggccgtcgcg
tcccggaacgggtacgtcgacgacgccgtgatcgaggacggcgactaccgggtgacgatt
cacctcgcgccgagcgtcgacgtccagcgcgtcgtcgagacggtcgagtcggcctctccg
gacgccgaactgcgctgtcatcgccagatcatccggcccgcggacgatcctcggcccatc
cagcgccgtctcgcggcggatctcacggatcgacaacacgccgtgctttcggccgcctac
tacgcgggctttttcgagtggccgagagagacttccgggaccgagctcgccgagtcgctg
gatatcgcaccgccgacgctccaccagcacctccggacggccgagctgaaagtcctcgag
tcgctgttttcggccccggaagaacccgcgaaccggtcgtaa
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