Natronococcus occultus: Natoc_1797
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Entry
Natoc_1797 CDS
T02426
Name
(GenBank) putative hydrolase of the metallo-beta-lactamase superfamily
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
nou
Natronococcus occultus
Pathway
nou03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nou00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Natoc_1797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nou03019
]
Natoc_1797
Messenger RNA biogenesis [BR:
nou03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Natoc_1797
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B_2
Lactamase_B
RMMBL
Motif
Other DBs
NCBI-ProteinID:
AGB37595
UniProt:
L0JZ58
LinkDB
All DBs
Position
complement(1739963..1741315)
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AA seq
450 aa
AA seq
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MEIEIATIGGYEEVGRQMTAVRAGDDVVIFDMGLNLSQVLIHDNVETERMHSLDLIDMGA
IPDDRIMSDLEGDVQAIVPTHGHLDHIGAISKLAHRYDAPIVATPFTIELVKQQIEGEQK
FGVENDLVKMEAGETMSIGDSGKVDLEFVNVTHSIIDAINPVLHTPEGAVVYGLDKRMDH
TPVIGDPIDMERFREIGREGNGVLCYIEDCTNASKKGRTPSENVAREHLRDVLYSMEDYD
GGIVATTFSSHISRVTSLVEFAKDIGRQPVLLGRSMEKYSGTAERLDFVDFPDDLGMFGH
RKSVDRTFKRIMNEGKENFLPVVTGHQGEPRAMLTRMARGETPYELDDGDKVVFSARVIP
EPTNEGQRYQAEKLLGMQGARVYDDIHVSGHLNQEGHYEMLDALQPQHIIPAHQDLSGFS
SYVNLCESEGYQMGRDLHVTRNGNLIQLVD
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgaaattgcaacgattggcggttacgaggaagtcggacggcagatgactgcc
gttcgcgccggcgacgacgtcgtcatcttcgacatggggctgaacctctcgcaggttctg
atccacgacaacgtcgaaaccgagcggatgcacagtctcgatctgatcgacatgggcgcg
attccggacgatcggatcatgagcgacctcgagggcgacgtccaggcgatcgtcccgacc
cacggtcacctcgaccacatcggtgccatctcgaagctggcccaccggtacgacgcaccg
atcgttgccacaccgtttacgatcgaactggtcaaacagcagatcgagggcgaacagaag
ttcggcgtcgagaacgacctcgtgaagatggaggccggcgagacgatgtcgatcggcgac
tccggcaaggtcgatctcgaattcgtcaacgtcacccactcgatcatcgacgcgatcaac
cccgtgctccacacccccgagggtgcggtcgtctacgggctcgacaagcggatggatcac
acgccggtcatcggcgacccgatcgacatggagcggttccgcgagatcggccgcgagggc
aacggcgtgctgtgttacatcgaggactgtaccaacgcgagcaagaagggccgtaccccc
agcgagaacgtcgcccgcgaacacctccgggacgtcctctacagtatggaggactacgac
ggcgggatcgtcgcgacgacgttctcgagtcacatctcgcgggtgacgagcctcgtcgag
ttcgcgaaggatatcggtcggcagccggtcctgctcgggcgctcgatggagaagtactcc
ggcaccgccgagcgactcgacttcgtcgacttccccgacgatctggggatgttcggccac
cgcaagtccgtcgaccgcacgttcaagcggatcatgaacgagggcaaggagaacttcctg
ccggtcgtcaccggccaccagggtgagccccgtgcgatgcttacccggatggctcgcggc
gagaccccctacgagctggacgacggcgacaaggttgtcttctcggcacgggtcatcccg
gagccgaccaacgagggccagcgttaccaggccgagaagctgctgggcatgcagggcgct
cgtgtctacgacgacatccacgtctcggggcacctcaatcaggagggccactacgagatg
ctggatgccctccagccccagcacatcatcccggcccatcaggatctgagcgggttctcc
agctacgttaacctctgcgagagcgaggggtaccagatgggacgagacctgcacgtgacg
cgcaacgggaacctcatccagcttgtcgactga
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