Natronococcus occultus: Natoc_1825
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Entry
Natoc_1825 CDS
T02426
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
nou
Natronococcus occultus
Brite
KEGG Orthology (KO) [BR:
nou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nou03016
]
Natoc_1825
Enzymes [BR:
nou01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
Natoc_1825
Transfer RNA biogenesis [BR:
nou03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
Natoc_1825
Prokaryotic type
tRNA splicing ligases
Natoc_1825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AGB37620
UniProt:
L0JZ85
LinkDB
All DBs
Position
complement(1761362..1762822)
Genome browser
AA seq
486 aa
AA seq
DB search
MTTFDADGITLEKVRDYVWEIPQEGEMNVPARVLASEALLEEISEDKTLQQLTNTTHLPG
ITTNAICMPDGHQGYGFPVGGVGAIDAENGCISPGAVGYDINCGVRMMRTNLTYDELQGR
EEELVDSLFANIPSGLGGGGIVEADIDTVEEILARGVDWALEHGHAVEDDLLHCEDEGMR
EGADPDKVSQKAKDRGKNQIGSLGSGNHFLEVQRVTDVFDDEVGAAFGLEEDRIVVLIHC
GSRGLGHQTCNDYLRKIEQQHKGLLDRLPDKELAAAPAGSQLAEDYYAAMNAAINFAWVN
RQLIMHRTRQVFERVFDRTWEEMEMELLYDVAHNIAKKETHTVGDEERELYVHRKGATRA
FPAGHPEVPKAYRDVGQPVIIPGSMGAGNFVLRGGENSMDLTFGSTAHGAGRLMSRTQAK
NEYWGGDVQQELEDQQQIYVKAQSGATVAEEAPGVYKDVDEVVRVSDELGIGDKVARTFP
VCNIKG
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgactacgttcgatgccgacggcatcacgctcgagaaggtgcgcgactacgtctgggag
atcccccaggagggcgagatgaacgttcccgcgcgggtgctggccagcgaggccctgctc
gaggagatcagcgaggacaagaccctccagcagctcacgaacacgacccacctgccgggg
attacgaccaacgcgatctgtatgcccgacggccaccagggctacggtttccccgtcggc
ggagttggcgcgatcgacgccgagaacggctgtatctcgcccggggcggttggttacgac
atcaattgcggtgtgagaatgatgcggacgaacctcacgtacgacgagctccagggacgc
gaggaggaactcgtcgactccctctttgccaacatcccttcgggactcggcggtggaggg
atcgtcgaggccgacatcgacaccgtcgaggagatcctcgctcgcggtgtcgactgggcc
ctcgagcacggccacgccgtcgaggacgacctcctgcactgcgaggacgaggggatgcgc
gaaggcgcggatcccgacaaggtgagccagaaggcaaaggaccgcgggaaaaaccagatc
ggctcgctgggctcggggaaccacttcctcgaggtccagcgggtcacggacgtcttcgac
gacgaggtcggcgcggcgttcggcctcgaggaggaccggatcgtcgtcctcattcactgc
ggctcccggggcctgggccaccagacctgtaacgactacctgcgcaagatcgagcaacag
cacaagggactgctcgatcggctgccagacaaggagctggctgcggcacctgcaggatcg
cagctcgccgaggactactacgcggcgatgaacgcggcgatcaacttcgcgtgggtcaac
cgccagctgatcatgcaccgcactcgccaggtcttcgagcgcgtgttcgaccgcacctgg
gaggagatggagatggagctgctgtacgacgtcgcccacaacatcgcaaagaaagagacg
cacacggtcggggacgaagaacgcgagctctacgtccaccgcaagggcgcgaccagagcc
ttccccgcgggccacccggaggtgccgaaggcctatcgcgacgttggccagccggtcatc
atccccggcagcatgggtgcggggaacttcgtcctgcggggtggcgagaactcgatggat
ctgaccttcggctcgaccgcccacggcgccggccggctgatgagccgcacccaggcgaaa
aacgagtactggggcggggacgtccagcaggaactcgaagaccagcaacagatctacgtc
aaggcccagtcgggcgcgaccgtcgccgaggaggcgccgggcgtctacaaggacgtcgac
gaggtcgttcgcgtctccgacgaactcggtatcggcgacaaggttgcgcggacgttcccc
gtctgtaacatcaagggttga
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