Natronococcus occultus: Natoc_1832
Help
Entry
Natoc_1832 CDS
T02426
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
nou
Natronococcus occultus
Pathway
nou04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nou00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Natoc_1832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nou03019
]
Natoc_1832
03009 Ribosome biogenesis [BR:
nou03009
]
Natoc_1832
04131 Membrane trafficking [BR:
nou04131
]
Natoc_1832
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nou04147
]
Natoc_1832
Messenger RNA biogenesis [BR:
nou03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Natoc_1832
Ribosome biogenesis [BR:
nou03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Natoc_1832
Membrane trafficking [BR:
nou04131
]
SNARE
SNARE associated proteins
Others
Natoc_1832
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Natoc_1832
Exosome [BR:
nou04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Natoc_1832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
TIP49
AAA_5
AAA_33
AAA_22
AAA_14
NPHP3_N
RNA_helicase
nSTAND3
AAA_28
AAA_7
Mg_chelatase
ABC_tran
AAA_25
AAA_3
IstB_IS21
DUF815
Sigma54_activat
NB-ARC
TsaE
AAA_lid_PRS2_C
Zeta_toxin
Parvo_NS1
AAA_24
ATPase
AAA_11
ATPase_2
AAA_18
AAA_17
AAA_30
PhoH
SLFN-g3_helicase
bpMoxR
Vps4_C
Bac_DnaA
Zot
HJURP_C
Motif
Other DBs
NCBI-ProteinID:
AGB37627
UniProt:
L0JX53
LinkDB
All DBs
Position
complement(1767107..1769368)
Genome browser
AA seq
753 aa
AA seq
DB search
MKLTVKPLKQKDAGRGLAAIDRVSMRELDLENGDYIVIEGKGDSQAVARVWPGYPEDEGR
GIVRIDGRLRQEADVGIDDSVDIEPADVQPANSVTVALPQNLRIRGDIGPLVRDKLSGQA
VTEGQTVPFSLSFGPMASSGQSVPLKIASADPSGTVVITDSTNIEISETPAEQVSTDADG
SPEGVPNITYEDIGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTL
MAKAVANEIDAHFETISGPEIMSKYYGESEEQLREVFEDAEENAPAIIFIDELDSIAAKR
EEAGGDVERRVVAQLLSLMDGLEERGRVTVIAATNRVDAIDPALRRGGRFDREIEIGVPD
KGGRKEILQVHTRGMPLSEDVDLEHYAENTHGFVGADLESLAREGAMNALRRIRPDLDLE
SDEIDAEILESLEVTEGDVKEALKGIQPSAMREVFVEVPDITWEDVGGLGDTKERLRETI
QWPLDYPEVFEQMDMQAAKGVLMYGPPGTGKTLLAKAVANESQSNFISIKGPELLNKYVG
ESEKGVREVFEKARSNAPTVIFFDEIDSIAGERGQRQGDSGVGERVVSQLLTELDGLEEL
EDVVVIATTNRPDLIDSALLRPGRLDRHVHVPVPDEEGRRKIFEVHTRDKPLADAVDLDW
LAGETEGYVGADIEAVCREASMAASREFINSVDPDDMPDTIENVRISKEHFERALEEVQP
SVTPETRERYEEIEQEFQTAEPESEDQLGRTFQ
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaccgtcaaacccctgaaacagaaggacgcgggccgcgggctcgccgcgatc
gaccgcgtctcgatgcgcgagctcgacctcgagaacggcgactacatcgtcatcgagggc
aagggcgatagccaggccgtcgcgcgcgtctggcccggctacccggaggacgagggccgc
ggcatcgttcggatcgacggccgtctgcgccaggaggccgacgtcgggatcgacgacagc
gtcgatatcgagccggccgacgtccagcccgcgaactcggttacggtcgcgctcccgcag
aacctccgcattcgcggcgacatcggcccgcttgtgcgcgacaagctgtccggccaggcg
gtcaccgaggggcagacggtgccgttctcgctctcgttcggtccgatggcaagctcgggg
cagtcggtgccactgaagatcgcgagcgccgatccgtccggaacggtcgtcatcacggac
tcgacgaacatcgagatctccgagacgccggccgagcaggttagcaccgacgccgacggc
tcgcccgagggcgtgccaaacatcacctacgaggacatcggcggtctggacgacgagctc
gatcaggttcgcgagatgatcgagctgccgatgcgccaccccgagctgttccagcagctc
ggcatcgaaccgcccaagggcgtgctcctgcacggcccgccgggcaccggaaagaccctg
atggccaaggctgtcgccaacgagatcgacgcccacttcgagacgatctccggcccggag
atcatgtcgaagtactacggcgagagcgaagagcagctccgcgaggtgttcgaggacgcc
gaggagaacgcgcccgcgatcatcttcatcgacgagctcgactccatcgccgccaaacgc
gaggaggccggcggcgacgtcgaacgccgcgtggtcgcgcaactgctcagcctgatggac
ggcctcgaggaacggggccgggtcaccgtcatcgccgcgaccaaccgcgtcgacgcgatc
gaccccgcgctgcgacggggcgggcgcttcgaccgcgagatcgagatcggcgtccccgac
aagggcggccgcaaggagatcctgcaggtccacacccgcgggatgcccctgtccgaggac
gtcgacctcgagcactacgccgagaacacccacggcttcgtcggcgccgacctcgagagt
ctcgcccgcgagggcgcgatgaacgccctgcgccggatccgtcccgatctcgacctggaa
tccgacgagatcgacgccgagatcctcgagtccctcgaggtgaccgagggcgacgtcaag
gaggcgctcaaggggatccagccctcggcgatgcgggaggtcttcgtcgaggttcccgac
atcacctgggaggatgtcggcgggcttggcgacaccaaagagcgcctgcgcgagacgatc
cagtggccgcttgactaccccgaggtcttcgagcagatggacatgcaggccgccaagggc
gtcctcatgtacggcccgcccggcaccgggaagacgctgctggccaaagccgtcgcgaac
gagtcccagtcgaacttcatctcgatcaaggggcccgaactcttgaacaagtacgtcggt
gagtccgagaagggagttcgggaggtcttcgagaaggcccgctcgaacgccccgaccgtg
atcttcttcgacgagatcgactcgatcgcgggcgaacgcgggcagcgacagggcgattcg
ggcgtcggtgaacgcgtcgtcagccagctgctgaccgagctcgacggcctcgaggaactc
gaggacgtcgtcgtgatcgcgacgaccaaccgcccggatctgatcgactcggcgctgctc
cgtccgggccggctcgatcgccacgtccacgtgccggttcccgacgaggagggccgcagg
aagatcttcgaggtccacacccgcgacaagcctctggccgacgcggtcgatctcgactgg
ctcgcgggcgagaccgagggctacgtcggcgccgacatcgaggccgtctgtcgcgaggcc
tcgatggccgccagccgcgagttcatcaactcggtcgaccccgacgatatgcccgacacc
atcgagaacgtccgcatcagcaaggaacacttcgagcgcgctctcgaggaggtccagccg
agcgtgactcccgagacccgcgagcgctacgaggagatcgaacaggagttccagaccgcc
gaaccggaaagcgaggaccagctcggccgcaccttccagtga
DBGET
integrated database retrieval system
