Natronococcus occultus: Natoc_1870
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Entry
Natoc_1870 CDS
T02426
Name
(GenBank) apurinic endonuclease APN1
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
nou
Natronococcus occultus
Pathway
nou03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Natoc_1870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nou03400
]
Natoc_1870
Enzymes [BR:
nou01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Natoc_1870
DNA repair and recombination proteins [BR:
nou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Natoc_1870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AGB37664
UniProt:
L0JZX6
LinkDB
All DBs
Position
1803888..1804760
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AA seq
290 aa
AA seq
DB search
MKVGAHVSISGSRVSSDDETPPYDDVRNAVHRQRAFGGNCGQIFTTSPQVWAQPEISDEA
ATGFREESDELLEGPWVIHSSYLVNLCTPKEDLRRKSKESMQAELDAAEKLGVPYVNVHL
GAHTGAGVEGGLDNAAGVIDDLDVPEDVQILIESDAGSGTKLGGEFEHLAGIIDRTEAEI
GICIDTAHTLVAGNDLTTPEAVDETVSRFDDEVGLEHLEYIHLNDSKHDVGTHKDEHALI
GEGYIGEDGIRAIVNHPDLRELPFALETPTEDGKGFAWNIEKTKELRDEA
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcggcgcacacgtctcgatctccggctcgcgcgtctcctccgacgacgaaacg
cccccctacgacgacgtccgcaacgcggtccaccgccagcgcgccttcggcggcaactgc
gggcagatcttcacgacctcgccgcaggtctgggcccagcccgagatcagcgacgaggcc
gccacgggctttcgcgaggagagcgacgaactgctcgaggggccgtgggtgatccactcc
tcgtacctggtcaacctctgtacgcccaaggaggacctgcgccggaagtccaaagagagc
atgcaggccgaactcgacgcggcagagaagctgggtgttccgtacgtaaacgtccatctg
ggcgcgcatacgggagcgggcgtcgagggcgggctcgacaacgccgcgggcgtcatcgac
gacctcgacgtccccgaggacgtccagatcctcatcgagtccgacgcgggtagcgggacg
aaactgggcggcgagttcgaacatctcgcggggatcatcgatcgcaccgaggccgagatc
gggatctgtatcgacaccgcccacacgctggtcgcgggcaacgacctcaccacccccgag
gccgtcgacgagaccgtctcccggttcgacgacgaggtcggcctcgaacacctcgagtac
atccacctcaacgactcgaaacacgacgtcggcacccacaaggacgaacacgccctcatc
ggcgaggggtacatcggcgaggacggcatccgcgcaatcgtcaaccaccccgacctgcgg
gagctccccttcgccctcgagacgcccaccgaggacgggaaggggttcgcctggaacatc
gagaagacgaaggaactgcgcgacgaggcgtaa
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