Natronococcus occultus: Natoc_2511
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Entry
Natoc_2511 CDS
T02426
Name
(GenBank) tRNA intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
nou
Natronococcus occultus
Brite
KEGG Orthology (KO) [BR:
nou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nou03016
]
Natoc_2511
Enzymes [BR:
nou01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
Natoc_2511
Transfer RNA biogenesis [BR:
nou03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
Natoc_2511
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
AGB38282
UniProt:
L0JZ37
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All DBs
Position
complement(2408139..2409176)
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AA seq
345 aa
AA seq
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MSLEGRFEDGVVRVGGDARQRYHDSRGYGYPLAGNEIALAPVEAAHLLYRGDLAAVVDGD
ERLDFRSLLAREPGPDFGVRFLVYADLRERGFYLSPAAEPWIEDPPETEFAVFPRGKGPD
DGEIAYALQVLGERTDVAGRDLEDGVLAVVDEESEITYFEVSRRDPSGSSATGLPDGCSA
DLLADRVVVWEPPLELYERTFYGQPLEGREYDEPTLQCSLLEATYLAERGALGLDPAAVR
ERGREVEGERFDRRLRVYAELRERNIVPKTGYKFGADFRTYADVESVEDLGHSELLVRVH
PADHVFEPRDIALDVRLAHGVRKTMVFALVAEDDIEWWSVERLTP
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcgaggggcggttcgaggacggcgtcgtccgcgtcggtggcgacgcccgccag
cgctatcacgactcgcggggctacggctacccgcttgcgggcaacgagatcgccctcgcg
ccggtcgaggcggcacatctactctaccggggcgatctcgcggccgtcgtcgacggcgac
gagcgactcgacttccgatcgttgttggcccgcgagcccggccccgacttcggggttcgc
tttctggtctatgccgacctccgtgagcgaggcttctacctttcgccggccgccgagccg
tggatcgaggatccaccggagacggagttcgccgtctttccccgcggaaaaggacccgac
gacggcgagatcgcctacgccctgcaggttctcggagagcgaaccgacgtcgccggacgg
gacctcgaggacggcgtcctcgcggtcgtcgacgaggaaagcgagatcacgtacttcgag
gtgagccgacgggacccgtcgggatcctccgcgacgggactccctgacggctgtagcgcg
gatctgctcgccgaccgggtcgtcgtctgggagccgcccctggagctgtacgaacggacg
ttctacggccagcccctcgagggtcgggagtacgacgagccgacgctgcagtgttccctg
ctcgaggcgacctacctcgccgagcggggcgcgctcggcctcgatcccgcggcggtccgg
gagcggggccgcgaggtcgagggcgagcggttcgatcgccgactgcgggtctacgccgaa
ctccgcgagcgcaatatcgtccccaagaccggatacaagttcggcgcggacttccggacc
tacgccgacgtcgagagcgtcgaggatctcggtcactccgaactgctggtgcgggtccat
cccgccgatcacgtcttcgagcctcgcgacatcgccctcgacgttcggctggcccacggg
gtccgcaagacgatggtgttcgcgctggtcgccgaggacgacatcgagtggtggtcggtc
gagcggctgacgccctga
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