Natronococcus occultus: Natoc_3445
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Entry
Natoc_3445 CDS
T02426
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nou
Natronococcus occultus
Brite
KEGG Orthology (KO) [BR:
nou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nou03016
]
Natoc_3445
Enzymes [BR:
nou01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Natoc_3445
Transfer RNA biogenesis [BR:
nou03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Natoc_3445
Prokaryotic type
Natoc_3445
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
PUA
Pus10_C
DUF3701
Motif
Other DBs
NCBI-ProteinID:
AGB39174
UniProt:
L0K475
LinkDB
All DBs
Position
complement(3378333..3379235)
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AA seq
300 aa
AA seq
DB search
MALRGPPEERSPAELLRFGVVNLDKPPGPSSHQVSGWLRDEVADALAERGAEPIDQAAHA
GTLDPKVTGCLPVMLGDATRLAQTFLEGDKEYVAVLECHGSVPEDADSIVAEFEGPIYQK
PPRKSAVSRRLRTREIYALDVLEAEDRRLLLRIRCESGTYVRKLCHDLGLALGTGAHMGH
LRRTATTPFDDTSLHTAQEFYDALAFWLEDDDPEPLFEIVDPAERILEGIPQVVIAESAA
EQVATGAPVYAPGVLEADDAERGSLVACTTPDGAAVCLGELVGDPEDDAGTVVDLERVLV
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcgtggtccacccgaagagcgatcacccgccgaactgttgcggttcggcgtc
gtcaacctcgacaaaccgcccggcccctcctcccaccaggtcagcggctggcttcgagac
gaagttgcagacgccctcgccgagcgaggcgcggagccgatcgaccaggctgcccacgcc
ggcacgctcgatccgaaggtgacgggctgtctcccggtgatgctcggggacgcgacgcgg
ctcgcccagacgttcctcgagggcgacaaggagtacgtcgccgtcctcgagtgtcacggc
tcggtgccggaagacgccgactcgatcgtcgccgagttcgagggtccgatctaccagaaa
ccgccccgcaagagcgccgtctcgcgccggcttcgcacccgcgagatctacgccctcgac
gtcctcgaggccgaggaccgacggctcctcctgcggatccgctgtgagagcgggacctac
gtccgcaagctctgtcacgacctggggctcgcgctcggtacgggcgctcacatgggccat
ctccgacggacggcgacgacgccgttcgacgatacgagcctgcataccgcccaggagttc
tacgacgcgctcgcgttctggctcgaggacgacgaccccgagccgctgttcgagatcgtc
gatcccgccgagcggatcctcgaggggatcccacaggtggtgatcgccgagagcgcggcc
gagcaggtcgcgacgggcgcgcccgtctacgccccgggcgtcctcgaggccgacgacgcc
gagcggggctcgctggttgcctgtacgacgccggacggggcagcggtctgtctgggtgaa
ctggtcggcgaccccgaggacgacgccggaaccgtcgtcgacctcgagcgcgtactggtc
tga
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