Natronococcus occultus: Natoc_3622
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Entry
Natoc_3622 CDS
T02426
Name
(GenBank) bacteriocin biosynthesis docking scaffold, SagD family
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
nou
Natronococcus occultus
Brite
KEGG Orthology (KO) [BR:
nou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nou03009
]
Natoc_3622
Ribosome biogenesis [BR:
nou03009
]
Prokaryotic type
ribosomal protein modification factors
Natoc_3622
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Gene cluster
GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
AGB39339
UniProt:
L0K4R5
LinkDB
All DBs
Position
3560939..3562660
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AA seq
573 aa
AA seq
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MHVSVVGEDPVRDAVETALADVDVSVRSAAPTDLEDARFAVVSDVAGAATFDRANEAALS
GDTPWIAVEIGGVGGRPIADLDAAVSGFAPGTGCFDCLRTRVDSHLESAADEPRADSSAA
RFAGALAGRECVRVLSGEERSVIGHVLEVPHRRRRFLPIPGCPCGGERDRSLDRDDDAFD
LDHAVEHVEQAIDDRVGIVETIGEVESFPAPYYLATTADTSGYSDASAANQAAGVDPDWN
AALMKAVGEGLERYCAGVYREDDFVRASEDVLERAVSPTELVRPDDAPASDPSDDHRWVE
GETLRTGEPIHLPAAAVQFPQPGDALVPAITTGLGLGSSTVDALLSGLTEVLERDATMLA
WYSTFEPLGLDVDSETFAALERRAASEGLDVTAMLVTQDVDVPVVAAAVHREDGAWPAFA
AGSAAGLDATEAATAALAEALQNWMELRGLGPDEAESASAAIGEYASFPEPAREFIDVEQ
TVPAASVGPEPAPTGRDALEDVLERASDAELEPHAARLTTRDVAGLGFEAVRVVVPGAQP
LFTREPFFGERAREVPAELGFEPELEGPFHPYP
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtttccgtcgtcggagaggaccccgtccgcgacgccgtcgagaccgcgctcgca
gacgtcgacgtctcggttcgctcggccgcaccgaccgacctcgaggacgcccggttcgcc
gtcgtcagcgacgtcgccggcgcggcgacgttcgatcgggccaacgaggccgccctctcc
ggcgataccccctggatcgccgtcgagatcggcggtgtcggcggtcgtccgatcgccgac
ctcgacgccgcggtctcggggttcgcccccggtaccggctgtttcgactgcctacggact
cgcgtcgactcccacctcgagtcggccgccgacgagccccgcgccgactcgagcgcggct
cgctttgcgggtgcgctcgcgggacgggagtgcgtgcgggtgctgtcgggcgaggaacgg
tcggtgattggccacgtcctcgaggttccccaccgccgacggcgatttctgccgatcccg
ggctgtccctgcggcggcgagcgcgaccgaagcctcgaccgggatgacgacgctttcgac
ctcgaccacgccgtcgagcacgtcgagcaggcgatcgacgaccgggtggggatcgtcgag
acgatcggcgaggtcgagtcgttccccgcaccctactacctcgcgacgacggccgacacg
agcgggtacagcgacgccagcgcggccaaccaggctgcgggcgtcgatcccgactggaac
gcggcgctgatgaaggccgtcggcgaggggctcgagcgttactgtgcgggcgtctatcgc
gaggacgacttcgtccgcgcgagcgaggacgtcctcgagcgggcggtctcgccgaccgag
ctcgtccgtcccgacgacgcgccagcgtccgatccgagcgacgaccatcggtgggtcgaa
ggcgagacgctccggaccggcgaaccgattcatctgccggccgcggccgttcagttcccc
cagcccggcgacgccctcgtgcccgcgatcacgacggggctcggacttggctcctcgacg
gtcgacgccctgctgtcgggactgaccgaagtcctcgagcgggacgcgacgatgctggcc
tggtactcgacgttcgagccgctggggctcgacgtcgacagcgagacgttcgcggccctc
gagcgccgtgcagcgagcgaggggctcgatgtgacggcgatgctcgtcacccaggacgtc
gacgtcccggtcgtcgcggccgcggtccaccgcgaggacggtgcctggcccgcgttcgcg
gccggctccgcggcgggactggacgcgaccgaggcggcgacggcggcgctggcggaggcg
ctacagaactggatggagctgcgggggctcggtcctgacgaggcagaatcggcctcggcg
gcgatcggagagtacgcctcgttccccgagcccgcccgggagttcatcgacgtcgaacaa
accgtccccgcggcaagcgtcggtccagagccggccccgaccggacgcgatgccctcgag
gacgtcctcgagcgggcgagcgacgccgaactggagccccacgcggcgcggctgacgacc
cgcgacgtcgcggggcttggcttcgaggcggtgcgggtcgtcgtccccggcgcccagccg
ctttttacccgagagcctttcttcggcgagcgcgctcgggaggtgccggccgagctcggg
ttcgagcccgaactcgaggggccgttccacccctacccctga
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