Natronococcus occultus: Natoc_4062
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Entry
Natoc_4062 CDS
T02426
Name
(GenBank) DNA helicase, Rad3
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
nou
Natronococcus occultus
Pathway
nou03022
Basal transcription factors
nou03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nou00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Natoc_4062
09124 Replication and repair
03420 Nucleotide excision repair
Natoc_4062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nou03021
]
Natoc_4062
03036 Chromosome and associated proteins [BR:
nou03036
]
Natoc_4062
03400 DNA repair and recombination proteins [BR:
nou03400
]
Natoc_4062
Enzymes [BR:
nou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Natoc_4062
Transcription machinery [BR:
nou03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Natoc_4062
Chromosome and associated proteins [BR:
nou03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Natoc_4062
DNA repair and recombination proteins [BR:
nou03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Natoc_4062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
SLFN-g3_helicase
PhoH
AAA_16
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AGB39759
UniProt:
L0K5V5
LinkDB
All DBs
Position
complement(3998313..4000682)
Genome browser
AA seq
789 aa
AA seq
DB search
MTDWRSIFGHPQPYDEQVDGIETAIETARDGGYTVVEGACGTGKTMIALTAGIDLVRDPN
TDYERVFVLTSVKQQLRQFEDDLETINENLPDDWNPVSGLTLVGKADVCPYNRAGAGGID
DGNVYDRCESLRERTRDLTGEGGETTAGTLTARARQQQTGLADSGATGATGRFLETAGET
AAYPPEMSTYSDGGAVGAETEYCPFYAQYLEDLPDEEDDDPAEAVPFDFTATGMLTPDDL
VARSVRHGTCPHSVMGAALGHVEVVIGNYYHAFDPTTTTAFTGALLDDSTFVVCDEAHML
EPRVRDLVSDGVADQTLRDAETELSRVLQPIRFEREGREAQGGSKTADADLVRGELEDSD
VSFEELSRTLEFVRDLREELDRRVTAHLDRNHRGWQSNLTELSDAEIPLRDPQEPAVDDL
TEWAADAGYSDAVWVRAEDVGAVVERVLNEAEDEDRTRAAPAVGRVLGEWYRRDHTDYFR
EIELERTWDETEPADSWRRAYTARLALHNCVPSDAIGDRLAAFGGGILMSATLEPVAAFT
EVTGLDYLADEKDRPVVERRYGLHFPEENRESFAVAAPKYTYDNRGRPGETNPTRTHYAD
AAAKVARLPGNVLVGMPSYAEAEWIAGALEDRIEKPVLLDSASDDETTQSLKSDFFAGEG
KVLVTSLRGTLTEGVDYSGDRLSAAVVCGVPIVNTSSPRTTAVRRAYDDAFGDGFEYALT
IPAVRKARQAVGRVIRSAEDVGVRVLLDERYARDSWDSVREYLPDDGEFQPVSPDMLEVG
LDRFRSRRS
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgaccgactggcgctcgatcttcggccacccccagccctacgacgagcaggtcgacggt
atcgagaccgccatcgaaaccgctcgcgatggcggctacaccgtcgtcgagggggcctgt
ggcaccggaaagacgatgatcgcgctcacggccgggattgacctcgtgcgcgaccccaac
accgactacgagcgcgtcttcgtcctcacgagcgtcaaacagcagctgcgccagttcgag
gacgacctcgagacgatcaacgagaacctgcccgacgactggaaccccgtctcggggctg
acgctggtcgggaaggccgacgtctgtccgtacaaccgcgccggtgcaggaggaatcgac
gacggcaacgtctacgatcgctgcgagagcctgcgcgagcgcacccgcgacctcacgggc
gagggcggcgagacgactgcggggacgctgaccgcccgcgcccgccagcaacagaccggg
ctcgccgacagcggagcgacgggcgcgacgggacggttcctcgagaccgccggggagacc
gcggcctacccgccggagatgtcgacctacagcgatggcggcgcggtcggcgccgagacg
gagtactgcccgttctacgcccagtacctcgaggacttgcctgacgaggaggacgacgac
cccgccgaggccgtcccctttgatttcaccgcgaccgggatgttgacccccgacgacctc
gtcgcgcggtcggtccgtcacggcacctgtccccattcggtgatgggcgccgcgctgggc
cacgtcgaggtcgtcatcggcaactactaccacgcgttcgatcccaccacgacgaccgcg
ttcaccggcgccctgctcgacgactcgacgtttgtcgtctgcgacgaggcccacatgctc
gagccacgcgtgcgcgatctggtcagtgacggcgtcgccgaccagacgttacgggacgcc
gagacggagctctctcgagtgctccagccgatccggttcgagcgcgagggacgggaggcc
cagggcggttcgaagaccgccgacgccgacctcgtccggggcgagctcgaggacagcgac
gtctctttcgaggagctctcccgcaccctcgagttcgttcgggacctccgggaggagctc
gaccgtcgcgtcaccgcccacctcgaccggaaccaccgggggtggcagtcgaacctcacc
gagctctcggacgcggagattcctctgcgcgacccgcaggaacccgctgtcgacgacctc
accgagtgggccgccgacgcgggctacagcgacgccgtctgggtccgggccgaggacgtc
ggtgccgtcgtcgagcgcgtgttaaacgaggccgaggacgaggaccgaacccgcgcggcc
cccgccgtcggccgcgtcctcggcgagtggtaccgccgcgatcacaccgactacttccgg
gagatcgaactggaacgcacctgggacgagaccgagccggccgactcctggcgacgggcc
tacaccgccaggctcgctttacacaactgtgtgccaagcgacgcgatcggcgatcggctg
gcggcgttcggcggcgggattctgatgagcgcgaccctcgagcccgtcgcggcgttcacc
gaggtgactggcctggactatctcgccgacgagaaggatcgaccggtcgtcgaacgccgg
tacgggctccacttccccgaggagaaccgcgagagcttcgcggttgctgcgcccaaatac
acctacgacaaccgggggcggcccggcgagaccaatcccacgcggacccactacgccgac
gcggccgcgaaggtcgctcgcctccccggcaacgtcctcgtcgggatgcccagctacgcg
gaggccgagtggatcgcgggcgccctcgaggaccggatcgagaagcccgtgctgctcgat
tccgccagcgacgacgagacgacccagtcgctcaagagcgacttctttgcgggcgagggg
aaggtgctcgtcacgagtcttcgagggacgctcaccgagggggtcgactacagcggcgac
cgactctctgcagccgtggtctgtggcgtcccgatcgtcaacacctcgagtccgcggacg
acggccgtgcgccgggcctacgacgacgccttcggcgacggcttcgagtacgcgttgacg
atcccggcggttcggaaggcccgccaggcggtcggtcgggtcatccgctcggccgaggac
gtcggcgtccgcgtgttgctcgacgagcgctacgcccgggacagctgggactcggtgcgg
gagtacctccccgacgacggcgagttccagcccgtcagccccgacatgctcgaggtcggg
ctcgaccggttccggtcgcgacgctcctga
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