Novosphingobium sp. P6W: TQ38_001140
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Entry
TQ38_001140 CDS
T05550
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
nov
Novosphingobium sp. P6W
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nov03016
]
TQ38_001140
Enzymes [BR:
nov01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
TQ38_001140
Transfer RNA biogenesis [BR:
nov03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
TQ38_001140
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AXB75276
LinkDB
All DBs
Position
1:complement(221266..221889)
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AA seq
207 aa
AA seq
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MAVYLHEEDLPEGVLAPGPVAVDTETMGLITPRDRLCLVQISDGKGDEHLVRFAPGSAYD
APNLKAVLADPARLKLYHFARFDLAAVEHYMGVTAAPVFCTKIASKLVRTYTDRHGLKDL
VRELLGKEVSKQQQSSDWGAPELTEAQKDYAASDVRYLHAMHTILVTRLARENRTEIAQA
CFDFLPARARLDLAGWPDHDIFSHEAA
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctatctccacgaagaagatctccccgaaggcgtgcttgcgccggggcccgtc
gctgtcgacaccgaaacgatgggtctcatcacccctcgcgaccggctctgcctcgtgcag
atctcggatgggaagggggacgagcatctcgtccgcttcgctcccggcagcgcttacgac
gcgcccaacctgaaggccgtgctggccgatccggcgcgcctcaagctgtaccacttcgcg
cgcttcgatctggctgcggtggaacattatatgggcgtcactgcggcgccggtgttctgc
accaagatcgccagcaaactggtgcgtacctacacggatcgccacggcctcaaggacctc
gtgcgcgaattgctcggcaaggaagtgtccaagcagcagcagtcgagcgactggggcgcc
ccggaactgaccgaagcgcaaaaggactacgccgcatcggacgtgcgttacctgcacgca
atgcacaccatcctggtaacgcgccttgcccgtgaaaaccgcaccgagatcgcccaggcc
tgtttcgatttcctgcccgcccgcgcccggctcgacctggcaggctggcccgaccatgac
atcttcagccacgaagcagcctga
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