Novosphingobium sp. P6W: TQ38_001145
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Entry
TQ38_001145 CDS
T05550
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
nov
Novosphingobium sp. P6W
Pathway
nov03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TQ38_001145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nov03400
]
TQ38_001145
Enzymes [BR:
nov01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
TQ38_001145
DNA repair and recombination proteins [BR:
nov03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TQ38_001145
Prokaryotic type
TQ38_001145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PPE-SVP
Motif
Other DBs
NCBI-ProteinID:
AXB77956
LinkDB
All DBs
Position
1:221986..222672
Genome browser
AA seq
228 aa
AA seq
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MATQQSQSVPASWAPALDPVLATAEARKLGGWLKEEEAAGKHIFPPRGSRLRAFELTPLD
EVRVVILGQDPYHGAGQAHGLSFSVPEGVRVPPSLVNIYKELASDCGVTAPGHGNLEHWA
RQGVLLLNNALTVEEGQAGSHQNRGWEAITDAAVAAVAAKAQPCVFMLWGNHAKKKAMRV
AGLAKSHHLVLTAPHPSPLSAHAGFFGCRHFSRANEFLRENGRGTIAW
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacagcagtcccagagtgtaccggcaagttgggctccggcgctcgatccagtc
cttgctacggccgaggcgcgcaagcttggcggctggctcaaggaggaggaagccgcgggc
aagcacatctttccgccgcgcggcagccggctgcgcgctttcgagctgacgccgctggac
gaagtacgcgtggtgatcttggggcaggacccctaccacggcgccgggcaggcgcatgga
ctgtcgttttcggtgcccgagggggttcgggtgccgccctcgctggtgaacatctacaag
gaactggccagcgactgcggcgtgaccgcgccggggcatggcaacctcgaacattgggcg
cggcagggcgtgctgctgctcaacaacgccctcaccgtcgaggaggggcaggccgggtcg
caccagaaccggggctgggaggcgatcaccgacgcggctgttgctgccgtggcggccaag
gcgcagccttgcgtcttcatgttatggggcaatcacgcgaagaagaaggccatgcgcgtg
gcggggttggcaaaaagccaccacctcgtgctgacggccccgcatcccagcccgctttcg
gctcatgcgggcttcttcggttgccggcatttcagccgcgcgaacgaattcctccgcgag
aatgggcgcgggacgatcgcctggtga
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