Novosphingobium sp. P6W: TQ38_001835
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Entry
TQ38_001835 CDS
T05550
Name
(GenBank) AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
nov
Novosphingobium sp. P6W
Pathway
nov04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
TQ38_001835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nov03019
]
TQ38_001835
03009 Ribosome biogenesis [BR:
nov03009
]
TQ38_001835
04131 Membrane trafficking [BR:
nov04131
]
TQ38_001835
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nov04147
]
TQ38_001835
Messenger RNA biogenesis [BR:
nov03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
TQ38_001835
Ribosome biogenesis [BR:
nov03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
TQ38_001835
Membrane trafficking [BR:
nov04131
]
SNARE
SNARE associated proteins
Others
TQ38_001835
Autophagy
Aggrephagy
Other aggrephagy associated proteins
TQ38_001835
Exosome [BR:
nov04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
TQ38_001835
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_22
CDC48_2
AAA_5
AAA_2
AAA_14
AAA_33
TIP49
nSTAND3
IstB_IS21
NACHT
NPHP3_N
RNA_helicase
AAA_28
AAA_7
AAA_18
AAA_17
Mg_chelatase
Sigma54_activat
AAA_3
TsaE
Vps4_C
ABC_tran
AAA_30
Parvo_NS1
DUF815
AAA_24
AAA_11
NB-ARC
Zeta_toxin
ATPase
DUF3619
Motif
Other DBs
NCBI-ProteinID:
AXB75402
LinkDB
All DBs
Position
1:complement(367602..369917)
Genome browser
AA seq
771 aa
AA seq
DB search
MADTDTRTDERTVKLQVAAARQEESGQGIARLSRGALSELGALEGDVLEITGKAVTVARA
VLAYDEDEGLQVIRLDGLQRGNAEVGSGDHVVVRKAESRPAQRVVFAPAQKDMRLQGPAA
ALKRNFFGRPMVQGDLVATTGQQQVADIPPQLSRMFNTPAYALTQIRLNVVSTTPRGIVH
IDESTEVELREVFEEAHDARGDVNYDDVGGMGDTIRQLREMVELPLRYPELFTRLGVAPP
KGVLLHGPPGTGKTRLAQAVANESEASFFSINGPEIMGSGYGESEKHLREIFEEATKAAP
AIIFIDEIDSIAPKRDQVHGEAEKRLVAQLLTLMDGLNSRAHVVVIAATNRPDAIDEALR
RPGRFDREIVIGVPDESGRREILGIHTRGMPLGERVDLSELARTTHGFVGADLAALAREA
AIEAVRRIMPRLDLEARTIPNEVLESLQVTREDFLAALKRVQPSAMREVMVQVPNIGWAD
IGGLDDAQLKLKEGIELPLKTPEAFHKLGIRPAKGFLLYGPPGTGKTLLAKAVAKEAEAN
FISIKSSDLLSKWYGESEQQIARLFARARQVAPCVIFIDEIDSLVPARGMGGAGGEPQVT
ARVVNTILAEMDGMEELQSVVLVGATNRPALVDPALLRPGRFDELVYVGTPDAPGREHIL
GIHTGKMPLAGDVDLASIAARTERFTGADLEDVVRRAGLIAIRKRGAAVEQVTAEDFEDA
LEDSRATVTEEMESEYMRMKGELKKRAMEVTPIGFIAPGMVAPTRERKHGD
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggcggatacagacaccagaacagacgagcgcacggtcaagctgcaggtcgcagccgcc
cgccaggaagaaagcggccagggcatcgcccgcctctcacgcggggcactgtccgaactc
ggcgcgctggaaggcgacgtgctggagatcaccggcaaggcagtaaccgtggcgcgcgcc
gttctggcctatgacgaggacgaagggctgcaggtcatccgcctcgatgggttgcagcgc
ggcaatgccgaagtcggctcgggcgatcatgtggtggtccgcaaggccgaatcgcgcccc
gcccagcgcgtggtcttcgcgcccgcgcagaaggacatgcgcctgcagggtccggccgcc
gcgctgaaacgcaacttcttcgggcgcccgatggtgcagggcgatcttgtcgccaccacc
ggccagcagcaggtagcggacatcccgccccagctcagccgtatgttcaacacgccggcc
tatgcgctgacgcagatccgcctcaacgtcgtctccaccacgccgcgcgggatcgtccac
atcgacgaaagcaccgaagtggaactgcgcgaggtcttcgaagaagcccacgatgcgcgc
ggcgacgtcaattacgacgacgtcggcggcatgggcgacaccatccgccagctgcgcgag
atggtggaactgcccctgcgctatcccgaactgttcacgcgcctcggcgtcgcgccgccc
aagggcgtgctgctccacggcccgccgggcaccggcaagacgcgcctggcacaggccgtc
gccaatgaaagcgaagccagcttcttctcgatcaacggccccgaaatcatgggttccggc
tacggcgagagtgagaagcacctgcgcgagattttcgaggaagcgaccaaggccgcgccc
gcgatcatcttcatcgacgagatcgattctatcgcccccaagcgcgatcaggtccacggc
gaggcggaaaagcgcctcgtcgcacagctgctcacgctcatggacggactgaacagccgc
gcccatgtcgtcgtaatcgccgccacgaaccggcccgacgcgatcgacgaggcgctgcgc
cgccccggccgcttcgaccgcgagatcgtcatcggcgtgccggacgagagcggtcgccgc
gaaatcctgggcatccacacccgcggcatgccgctgggcgaacgggtggaccttagcgaa
ctagcccgcactacccacggtttcgtaggcgcagacctcgccgccctcgcccgcgaggct
gcgatcgaagccgtgcgccggatcatgccgcgcctcgacctcgaagcgcgcacgatcccc
aatgaagtgctggaaagtttgcaggtcacgcgtgaggacttcctggctgcactcaagcgc
gtccagccatcggccatgcgcgaagtcatggtgcaggtccccaatatcgggtgggccgac
atcggtggtctggatgatgcgcagctcaagctgaaggaaggcatcgagctgccgctgaag
acccctgaggcattccacaagctgggcatccgtccagccaagggcttcctgctctacggc
ccgccgggcactggcaagaccctgctggccaaggccgtcgccaaggaggccgaagcgaac
ttcatctcgatcaagtcctcggacctgctctcgaagtggtacggcgaaagcgaacagcag
atcgcccgcttgtttgcccgcgctcggcaggtagcgccttgcgtgatcttcatcgacgag
atcgacagcctggtgcccgcgcgcggcatgggcggcgccggcggcgaaccgcaggtgacg
gcccgcgtggtcaacacgatcctcgccgagatggacgggatggaggaactgcagtcggtc
gtgctggtgggcgccaccaaccgcccggcgctggtcgacccggcactgctgcgtccgggc
cggttcgacgaactggtctatgtcggcacccccgatgcgccggggcgcgagcatatcctg
ggcatccataccggcaagatgccgctggcaggcgacgtcgacctcgccagcatcgccgcc
cgtaccgaacgcttcactggcgcggatctggaagacgtggtccgccgcgccggcctgatc
gccatccgcaagcgcggtgcggcagtggagcaggtgactgccgaagacttcgaggatgcg
ctggaagacagccgcgccacggttaccgaggaaatggaatccgaatacatgcgcatgaag
ggcgagctgaagaagcgcgccatggaagtgacgccaatcggcttcatcgcgccgggcatg
gtcgcgcctactcgtgagaggaagcacggcgactga
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