KEGG   Novosphingobium sp. P6W: TQ38_004360
Entry
TQ38_004360       CDS       T05550                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
nov  Novosphingobium sp. P6W
Brite
KEGG Orthology (KO) [BR:nov00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:nov03016]
    TQ38_004360 (truB)
Enzymes [BR:nov01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     TQ38_004360 (truB)
Transfer RNA biogenesis [BR:nov03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    TQ38_004360 (truB)
 Prokaryotic type
    TQ38_004360 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB_C
Other DBs
NCBI-ProteinID: AXB75845
UniProt: A0A2Z5E8D9
LinkDB
Position
1:861380..862285
AA seq 301 aa
MPHGWIILDKPIGLGSTQAVAAVKRNLREAGYGKKVKVGHGGTLDPLASGVLPIALGEAT
KLAGRMLDATKTYLFTVRFGTQTDTLDLEGKVVAESDVQPSQVEVEAVLARFTGPIEQVP
PAYSALKVDGERAYDLARAGVEVELKSRSVTIHELGMDAFDAQEGATLRAKVSKGTYIRS
LARDIALALGSRGTVTMLRRIQAGPFEGSQAIPLDKLNEVGKGAPLEQILLPLEAGLDDI
PAIDLDPEQARAVRQGRVLTGMPHEDGLYCAKEGTVPVALVELSDGNVRVSRGFNLIDVA
E
NT seq 906 nt   +upstreamnt  +downstreamnt
atgccgcatggttggatcattctcgataagcccatcggccttggctcgacgcaggcggtg
gccgccgtgaagcgcaacctgcgcgaggcggggtatggcaagaaggtcaaggtgggccac
ggcggcacgctggacccgctggcctcgggcgtgctccccattgcgctgggtgaggcgacc
aagctggccgggcgaatgctcgatgccacaaagacctatctgttcaccgtccgcttcggg
acgcagaccgataccctggaccttgaaggcaaagtcgtcgccgagagcgacgtgcagccc
tcgcaagttgaggtcgaggccgtgctggcgcgcttcaccggaccgatcgagcaggtgccg
cccgcctattcggcgctcaaggtcgatggcgagcgtgcctatgacctggcgcgggccggt
gtcgaggtggagctgaaatcgcgcagcgtcactatccacgaactggggatggacgccttc
gatgcgcaggagggcgcgaccctcagggccaaagtttccaaggggacttacatccgcagc
ctggcgcgcgacattgcgctggcgttgggatcgcgcggcacggtgacgatgctgcgccgc
atccaggccggcccgttcgagggctctcaggcgattccgctggacaaattgaacgaagtg
ggtaagggcgcgcctcttgagcagatactcttgccgctggaggcggggctggacgacatc
ccggccatcgacctcgacccggagcaggcaagggcggtccgacagggccgtgttctaacc
ggaatgcctcatgaagatgggctttactgcgcgaaagagggcactgtcccggtcgcgctg
gtggagctttcggacggaaacgtccgcgtttccagggggtttaatctcattgatgtcgcg
gagtga

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