Novosphingobium sp. P6W: TQ38_004710
Help
Entry
TQ38_004710 CDS
T05550
Name
(GenBank) DNA (cytosine-5-)-methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
nov
Novosphingobium sp. P6W
Pathway
nov00270
Cysteine and methionine metabolism
nov01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
TQ38_004710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nov03000
]
TQ38_004710
03032 DNA replication proteins [BR:
nov03032
]
TQ38_004710
03036 Chromosome and associated proteins [BR:
nov03036
]
TQ38_004710
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
nov02048
]
TQ38_004710
Enzymes [BR:
nov01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
TQ38_004710
Transcription factors [BR:
nov03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
TQ38_004710
DNA replication proteins [BR:
nov03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
TQ38_004710
Chromosome and associated proteins [BR:
nov03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
TQ38_004710
Prokaryotic defense system [BR:
nov02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
TQ38_004710
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_methylase
HTH_31
HTH_3
HTH_28
HTH_Tnp_1
HTH_19
HTH_23
MerR
HTH_29
HTH_17
HTH_26
HTH_8
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AXB75903
LinkDB
All DBs
Position
1:959053..960276
Genome browser
AA seq
407 aa
AA seq
DB search
MQNEFATLRAQAAISIEELANRLGYSPRQLYRWERGDGTPRRAALNMLQNMAGGSATGFG
ESRFNFIDLFAGIGGIRKGFDAIGGHCVFTSEWNKYSQQTYAANFRDNHTLHGDITTIKT
HEIPDHDVLLAGFPCQPFSIAGVSKKNSLGRQHGFLDETQGTLFFDVARVLRDKRPAAFM
LENVKNLTSHDKGRTFQVILKTLTEELGYKVWHKVIDAKHFVPQHRERIVIVGFREEVPF
SWDDLDLPEKGSVKLKDILHPGDGTEKAEGAYTLGPDAIVNGKYTLTDKLWQYLQGYADK
HKAAGNGFGFGLVTPDDVARTLSARYYKDGSEILISQGKKVNPRRLTPRECARLMGYGDE
FRIPVSDTQAYKQFGNSVAVPVFHEVARIMQPHIQSLVEAGQQREAA
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacgaattcgcaacgctccgtgcacaggcagccatttctatcgaggagctggcg
aaccgtctgggctatagtccccgccagctataccggtgggagcggggcgacgggacgccc
cggcgcgccgcgctgaacatgctgcagaatatggctggcggatcggccaccggctttggt
gagagccgcttcaatttcatcgacctgttcgcagggataggcggcatccggaagggattt
gacgctatcggcgggcactgcgtgttcacatcggaatggaacaaatattcccagcagacc
tatgcggcaaatttccgcgataaccacacgcttcatggcgatatcaccacgatcaagacc
catgagattcctgaccatgatgttctgctggccggcttcccctgtcagcccttctccatc
gcgggtgtttcgaagaaaaactctctgggccgtcagcatggttttctcgatgaaacacag
ggcacgctgttcttcgatgtggcgcgcgttctgagggacaagcggcctgccgccttcatg
ctggagaatgtgaaaaatctgaccagccacgacaagggccggaccttccaggtgatcctg
aaaacgctgaccgaggagcttggctacaaggtctggcacaaggtgatcgatgcgaagcat
ttcgtgcctcagcaccgggagcgcatcgtcatcgtcggcttccgggaggaagtgccgttc
agctgggatgatctggacctgccggagaagggctcggtgaagctcaaggacattctgcat
cccggtgacggcaccgagaaggcggaaggggcttacacccttggcccggacgcgatcgtc
aacggcaaatatactctgaccgacaagctctggcagtatcttcagggctatgccgacaag
cataaggccgcaggcaatggcttcggtttcgggctggttacgccggacgatgtcgcccgt
accctgtcggcccgctattataaggacggatcggagatcctcatcagtcagggcaagaag
gtgaacccgcgccgtctgaccccgcgcgagtgcgcccgcctgatgggctatggagacgaa
ttccgcatcccggtatcggatacgcaggcctataagcaattcggtaactcggtcgctgtt
ccggtctttcatgaggtcgcccggatcatgcagccgcatatccagtctctggtcgaggca
gggcagcagcgcgaggctgcctga
DBGET
integrated database retrieval system
