Novosphingobium sp. P6W: TQ38_007085
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Entry
TQ38_007085 CDS
T05550
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
nov
Novosphingobium sp. P6W
Pathway
nov03030
DNA replication
nov03430
Mismatch repair
nov03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TQ38_007085
03430 Mismatch repair
TQ38_007085
03440 Homologous recombination
TQ38_007085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nov03032
]
TQ38_007085
03400 DNA repair and recombination proteins [BR:
nov03400
]
TQ38_007085
Enzymes [BR:
nov01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TQ38_007085
DNA replication proteins [BR:
nov03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TQ38_007085
DNA repair and recombination proteins [BR:
nov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TQ38_007085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
RuvB_N
AAA_5
AAA_22
AAA_16
AAA_30
AAA_14
AAA_19
AAA_assoc_2
AAA_24
AAA_18
Cdc6_lid
Glyco_tranf_2_5
DUF815
PIF1
AAA_2
Rad17
Motif
Other DBs
NCBI-ProteinID:
AXB78084
UniProt:
A0A2Z5EEP2
LinkDB
All DBs
Position
1:1463759..1465600
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AA seq
613 aa
AA seq
DB search
MFGEPAPEAEAVPEAEAAPTMAELEAAGQSAMFAEAAAPVPEAKPEAAKPAPVAAPKTPA
PAQAAAAQPYRVLARKYRPQTFAELIGQEAMVQTLANAIKRDRLAHAFLMTGVRGVGKTS
TARLIAKALNCIGADGQGGPTIDPCGKCEPCVAIAEGRHIDVIEMDAASHTGVDDVREII
EAVRYSAVSARYKIYIIDEVHMLSRNAFNALLKTLEEPPAHVKFLFATTEVDKLPVTVLS
RCQRFDLRRIPAPMLAGHFAYVCRQEGVEAEDEALAMVAAAAEGSVRDGLSILDQAIAHA
DLDGADLDGVVQVSAEKVRDMLGLSDKSVQRGLVSAILEGKGPDLLDIVARQFSLGVEPI
AIMRGLMDLIHRIAVAQVAGNAADAHSTEEREAIEGWAQRLRAGQLHRLWQLLLKGHDEV
KSAPDPLVAAQMALLRIMHAADMPDPGALVRKLEEIAARAPAAAPALEGGAPAPGAPAAS
APAAIMPRWEALVDDVEHIGELSTANTMRMQVRVVELAPGLLRYTQPPAFKEDIASILRG
GLQAATGERWQVERVDADGAPTLVEIAEVKKGADAEALRAAPLVEATMAAFPGAELIEDD
RPAAIGGGRNWRR
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcgagccggcgcctgaggccgaagcagtccccgaagcggaagccgctcccacc
atggccgaactggaagcggcagggcagtctgccatgttcgccgaagctgcagcgccagtg
cccgaagcgaaacccgaagccgccaaacctgcgccggtcgccgcgcccaagacgcccgcg
cccgctcaggccgccgccgcgcagccataccgggtgctagcgcgcaaataccgtccgcag
actttcgccgaactgatcgggcaggaggcgatggtccagaccctcgccaacgccatcaag
cgcgaccggctcgcccatgccttcctgatgaccggcgtgcgcggggtcggcaagacgtcg
accgcgcgccttatcgccaaggctctcaactgcatcggcgctgacgggcagggcggcccg
acgatcgacccctgcggcaagtgcgagccttgcgtggccatcgccgaaggccgccacatc
gacgtgatcgaaatggatgctgccagccacaccggcgtcgacgatgtgcgcgaaatcatc
gaggcggtgcgctattccgccgtttcggcgcgctacaagatctacatcatcgacgaagtc
cacatgctgtcgcgcaatgctttcaatgccttgctgaaaactcttgaggaaccgccggcg
catgtgaagttcctcttcgccacgaccgaggtcgacaagctgccggtcacggtgctgtcg
cgctgccagcgtttcgacctgcgccgtattcccgcgccgatgctggcgggacacttcgcc
tacgtctgccggcaggaaggcgtcgaggccgaggacgaggcgctcgccatggtcgccgcc
gctgccgaaggttcggtgcgcgatggcctgtcgatcctcgaccaggcgatcgcccatgcc
gaccttgacggcgccgatcttgacggggttgtccaggtcagcgccgaaaaggtgcgcgat
atgctgggcctctcggacaagagcgtgcagcgcgggctggtctccgcgatcctcgaaggt
aaggggcctgacctgctcgacatcgtcgcgcgccagttctcgctgggtgtcgagccgatc
gcgatcatgcgcgggttgatggacctgatccaccgcattgcggtggcgcaggtcgccggt
aatgccgccgacgcccattccaccgaggagcgcgaggcgatcgagggatgggcccagcgc
ctgcgcgccggtcaactccatcgcttgtggcaactgctgctcaagggccatgacgaagtg
aaatccgcgccagatccgctggtcgcggcgcagatggccctactgcgtatcatgcatgcc
gccgacatgcccgatcccggcgctctggtgcgcaagctggaggagatcgccgcgcgcgct
cccgcagctgcacctgcgctggagggcggcgcgcctgcgcccggcgcacctgccgcctct
gctccggcggcgatcatgccgcgctgggaggcgctggtcgatgacgtcgagcatatcggc
gagctgtccaccgccaataccatgcgcatgcaggtgcgcgtggtcgaactggcgccgggc
ctgctgcgctacacccagccgcccgcattcaaggaagatatcgcctccatcctgcgcggc
ggcctgcaggctgccaccggtgagcgttggcaggtcgagcgggtggacgcggatggcgcg
cccaccctggtggaaattgccgaagtgaagaagggcgcggatgccgaggccctgcgcgct
gcgccgctggtcgaggcgaccatggccgcctttccgggcgccgaattgattgaagacgac
cgtccggccgccatcggcggcgggcgcaattggagacgctga
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