KEGG   Novosphingobium sp. P6W: TQ38_009455
Entry
TQ38_009455       CDS       T05550                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K07712  two-component system, NtrC family, nitrogen regulation response regulator GlnG
Organism
nov  Novosphingobium sp. P6W
Pathway
nov02020  Two-component system
Brite
KEGG Orthology (KO) [BR:nov00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    TQ38_009455
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:nov02022]
    TQ38_009455
Two-component system [BR:nov02022]
 NtrC family
  GlnL-GlnG (nitrogen regulation)
   TQ38_009455
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 HTH_30 AAA_16 Mg_chelatase AAA MCM AAA_2 nSTAND3 AAA_30 Xre-like-HTH TIP49 VpsR DUF5612 AAA_19 Phage_NinH AAA_7
Other DBs
NCBI-ProteinID: AXB78141
LinkDB
Position
1:complement(1938034..1939500)
AA seq 488 aa
MPHSRRVLLLEDDMSIAIVITAALEDEGFAVVHCQTIAERDRQLAEHGFAAFVTDVMLPD
GDGIETIGRVRALHPDMPIVILSAQNTLDTAVRATDTGAFEYFPKPFDIDELARTVRQAA
GATQSQLEGEEPVADGLPLVGRSTAMQSVFRMITRVLRNDLTVLILGESGTGKELVAEAI
HQLGNRRSGPFIAVNTAAIPAELIESELFGHEKGAFTGAVARHVGKFEQAAGGTLFLDEI
GDMPMQAQTRLLRALQSGSVRRVGGREEIQLDTRIVAATNKDLEPEIAAGRFREDLYYRL
NVVPIHMPPLRDRRDDIDVLARHFLQHAANEGLPRRQLTAEAAELLSRQPWRGNVRELKN
FIYRMALLAREDLIDVDQVLPLLTPEPTATATGMGEDADHGASTSGPAHAPGDIAAAVAQ
WLSATRPASGTIYDSAMAAFERPLFAEVLKETAGNQLRAAQALGINRNTLRKRLGELSLD
PEEFTRRP
NT seq 1467 nt   +upstreamnt  +downstreamnt
atgcctcattcgcggcgcgtcctgctgctcgaggacgacatgtccatcgccatagtcatc
acggcggcgctggaggacgagggctttgccgtcgtccattgccagaccatcgcagaacgc
gaccggcagctggccgaacacggcttcgctgccttcgtcaccgatgtaatgctgcccgac
ggcgacggcatcgagacgatcggccgcgtccgcgcgcttcatcccgatatgccgatcgtg
atcctctcggcccagaacacgctcgataccgccgtgcgcgccaccgataccggcgctttc
gaatacttccccaagcccttcgacatcgacgaactggcgcgcaccgtgcgccaggccgcc
ggggcgacgcagagccagctggaaggtgaggagccggtcgcggacgggctgccgctagtg
ggccggagcaccgcgatgcaatcggtcttccgcatgatcacgcgggtactgcgcaacgac
ctgacggtgctgatcctgggcgaatcgggcaccggcaaggaactcgtcgcagaggcgatc
caccagctcggcaatcgccgcagcggtccgttcatcgccgtgaacaccgccgcgatcccc
gctgaactgatcgagagcgaattgttcgggcacgagaagggcgccttcaccggcgccgtc
gcgcgccatgtcggcaagttcgagcaggcggcgggcggcaccctgttcctcgacgaaatc
ggcgacatgccgatgcaggcccagacccgcctgctgcgcgcactccagtccggctcggta
cgccgcgtcggcgggcgcgaggaaatccagctcgacacccgcatcgttgccgcgaccaac
aaggaccttgagccggaaatcgccgccgggcgcttccgcgaggacttgtactaccgcctc
aatgtggtgccgatccacatgccccccttgcgcgaccggcgcgacgacatcgacgtgctt
gcgcgccatttcctccagcacgccgcgaacgaaggcctgccgcgccgccagctgacggca
gaagccgccgaactgctcagccgccagccctggcgaggcaacgtgcgggaactgaagaac
ttcatctatcgcatggccctgctggcgcgcgaggacctcatcgacgtcgatcaggtcttg
ccgctgctgactcccgagcccacggcgactgcgaccggcatgggtgaggacgccgatcac
ggcgcatcgacgagcggccctgctcacgccccgggcgacatcgccgcagcggtcgcacaa
tggctctcggccacccgcccggccagcggcactatctacgacagcgccatggccgccttc
gaacgcccgcttttcgccgaagtgctgaaggaaaccgcgggcaaccaactgcgcgccgcg
caggcactggggatcaatcgcaacaccttgcgcaagcgccttggcgaactgtcgctcgat
cctgaggaattcactcgtcgaccgtaa

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