Novosphingobium sp. P6W: TQ38_009505
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Entry
TQ38_009505 CDS
T05550
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
nov
Novosphingobium sp. P6W
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nov03032
]
TQ38_009505
03400 DNA repair and recombination proteins [BR:
nov03400
]
TQ38_009505
Enzymes [BR:
nov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
TQ38_009505
DNA replication proteins [BR:
nov03032
]
Prokaryotic type
DNA Topoisomerases
TQ38_009505
DNA repair and recombination proteins [BR:
nov03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TQ38_009505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
NTPase_1
DUF2835
Motif
Other DBs
NCBI-ProteinID:
AXB76691
LinkDB
All DBs
Position
1:1947929..1950703
Genome browser
AA seq
924 aa
AA seq
DB search
MSDETDITEHTGPEGEFIRVDIVDEMKTSYLDYAMSVIVSRALPDVRDGLKPVHRRILFA
SQEGGFVAGRPYRKSAKIVGDVMGNYHPHGDSAIYDALARMTQDWSMRLPLIDGQGNFGS
MDPDPPASMRYTEARLARVANSLLDDLDKDTVDFVDNYDGSRREPSVLPAKYPNLLVNGA
GGIAVGMATNIPPHNLGEVIDGCFAMMDNPAITAEELFHIIPGPDFPTAPLILGQHGARN
ASYTGRGSIVMRCRHHVEEARGASRGARSIVLTSIPYQVGKSNLVEKIAEAAKDKRIEGV
SDIRDESNREGMRVVVDLKRDASPEVVLNQIWRSTPAQSNFAANMLAIRGGRPEIMSLRD
ILQAFIQFREQVITRRTKFELNKARERAHILLGLVVAVSNMDEVVKIIRGASNPADARAK
LIAKEWPIGDIAAYIRLVEAIEPDAEQAGGSYRLSEAQVKAILDLRLHRLTALGRDEIGD
ELKELAVAIAGFLEILADRVKLYNVMRGELQAVRDAYATPRVSEITAAFDGIDDEDLIER
EDMVVTVTMDGYIKRTALSTFRAQNRGGKGRAGMATKEEDAVTTMFVTSTHNPVLFFSTA
GKVYRLKVYRLPEGGPTTRGRPIVNLLPALDKDETIQTVLALPEDETEWSKLSVVFATAK
GNVRRNSMDSFANIPSNGKFAMRFDEGSDDRLIGVALLAAADDVLLATRKGRAIRFAGDD
VREFTSRTSTGVRGMTLKEDDEVISLSILHRVGTDGEEREQYLRFAPWKGEKEGESTLAP
ERMEELAAREQFILTVCANGYGKMSSAYEYRRTGRGGQGITNIDNIGRNGPVVASFPATR
AQQLMLVTDQAKLIRLPLDSLRVIGRGSAGVRLFTVSNDEHVVSAVRLDEEPQDDVVAVI
PVADDAAETPDIETPEAPEAEGDE
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacgagaccgacatcaccgagcacaccggccccgagggcgaattcatccgcgtc
gacatcgtcgacgagatgaagacgagctatctcgattacgcgatgagcgtgatcgtgagc
cgcgcgcttcccgacgtgcgcgacggccttaaaccggtccaccgccgcattctgttcgcc
agccaggaaggcggcttcgttgccgggcggccttatcgcaagtcggcgaagatcgtcggc
gacgtcatgggcaactaccacccccacggcgacagcgcgatctacgacgctttggcgcgc
atgacccaggactggtcgatgcgcctgccgctgatcgacggtcagggtaacttcggttcg
atggaccccgatccgccggcctcgatgcgctataccgaagcgcgcctggcccgggtcgcc
aattcgctgcttgacgatctcgacaaggataccgtcgatttcgtcgacaactatgatggt
tcgcggcgcgagccttcggtgctgcccgcgaaatatcccaacctgctggtcaacggcgcc
ggcggcatcgcggtcggcatggccaccaacatcccgccccacaacctgggcgaggtgatc
gacggctgcttcgcgatgatggacaatcccgccatcaccgcggaggaactgttccacatc
atccccggccccgatttcccgaccgcgccgttgatcctgggccagcacggtgcacgcaat
gcgtcgtacaccggacgcggctcgatcgtgatgcgctgccgccaccacgtcgaagaagca
cgcggcgcaagccggggtgcccgctcgatcgtgctgaccagcattccctatcaggtcggg
aagtccaacctggtcgagaagatcgccgaagccgccaaggacaagcggatcgaaggcgtc
tcggacatccgcgacgaatcgaaccgcgaaggcatgcgcgtggtcgttgacctcaagcgt
gacgcctcgcccgaagtggtgctcaaccagatctggcgcagcaccccggcgcagtccaac
ttcgccgccaacatgctggcgatccgtggcggccggcccgagatcatgtcgctgcgcgac
attctccaagccttcatccagttccgcgagcaggttatcacccgccgcaccaagttcgaa
ctgaacaaggcccgcgaacgcgcgcacatcttgctcggcctggtggtcgcggtctcgaac
atggacgaggtcgtgaagatcattcgcggcgcgtccaacccggccgacgcgcgtgccaag
ctgatcgccaaggaatggccgatcggcgacatcgcggcctacatccgcctcgtcgaggcg
atcgaacccgatgccgagcaggctggcggcagctaccgcctgtccgaagcgcaggtgaag
gcgatcctcgacctgcgcctccaccgcctcaccgcgctaggccgcgacgagatcggcgac
gaactcaaggaactggcggtcgcgatcgccggattcctcgaaatcctggccgaccgcgtc
aaactttacaacgtgatgcgcggcgaacttcaggctgtgcgtgatgcttacgccaccccg
cgcgtttccgagatcaccgccgctttcgatgggatcgacgacgaagacctgattgagcgc
gaggacatggtggtgaccgtcaccatggacggctacatcaagcgcaccgccctctccacc
ttccgcgcgcagaaccggggcggcaagggccgcgccggcatggcgacgaaggaagaggat
gccgtgacgacgatgttcgttacctccacgcacaacccggtgctgtttttctccactgcc
ggcaaggtctaccgcctcaaggtctaccgcctgcccgaaggcggtccgaccacgcgcggg
cgcccgatcgtcaacctcctgcccgcgctggacaaggacgagacgatccagacggtgctc
gccctgcccgaggacgagaccgagtggagcaaactgtcggtcgtgttcgccacggccaag
ggcaatgtgcgccgtaactcgatggattccttcgcgaatatccccagcaacggcaagttc
gcgatgcgcttcgacgaaggcagcgacgatcgactgatcggcgtcgccctgctcgcggcg
gcggacgacgtgctgctcgccacccgcaagggccgcgcgatccgcttcgccggcgacgac
gtgcgcgaattcacgagccgcacttccaccggcgttcgcggcatgacgctcaaggaagac
gacgaggtcatctcgctgtcgatcctgcaccgcgtcggcactgacggcgaggagcgcgag
caatacctgcgcttcgccccgtggaagggcgagaaggaaggcgagtccacccttgcgccc
gaacgcatggaagaactggccgcgcgcgaacagttcatcctcaccgtatgcgccaatggc
tacggcaagatgtcctcggcctacgagtatcgccgcaccggacgcggcggccagggcatc
accaatatcgacaacatcggccgtaacgggccggtggtggccagcttcccggccacccgt
gcacagcaactgatgctggtcaccgaccaggccaagctgatccgcctgccgctcgattcg
ctgcgggtcatcggacgcgggtcggcaggcgtgcgcctgttcaccgtatcgaacgacgag
cacgtcgtcagcgccgtgcgcctcgacgaagagcctcaggacgacgtggtcgcagtgatc
cccgtggcagacgatgcggccgaaacgccggacatcgaaacccccgaggcacccgaagcc
gagggcgacgagtga
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