Novosphingobium sp. P6W: TQ38_009595
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Entry
TQ38_009595 CDS
T05550
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
nov
Novosphingobium sp. P6W
Pathway
nov00010
Glycolysis / Gluconeogenesis
nov00020
Citrate cycle (TCA cycle)
nov00260
Glycine, serine and threonine metabolism
nov00280
Valine, leucine and isoleucine degradation
nov00310
Lysine degradation
nov00380
Tryptophan metabolism
nov00620
Pyruvate metabolism
nov00630
Glyoxylate and dicarboxylate metabolism
nov00640
Propanoate metabolism
nov00785
Lipoic acid metabolism
nov01100
Metabolic pathways
nov01110
Biosynthesis of secondary metabolites
nov01120
Microbial metabolism in diverse environments
nov01200
Carbon metabolism
nov01210
2-Oxocarboxylic acid metabolism
nov01240
Biosynthesis of cofactors
Module
nov_M00009
Citrate cycle (TCA cycle, Krebs cycle)
nov_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
nov_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
nov_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
TQ38_009595 (lpdA)
00020 Citrate cycle (TCA cycle)
TQ38_009595 (lpdA)
00620 Pyruvate metabolism
TQ38_009595 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
TQ38_009595 (lpdA)
00640 Propanoate metabolism
TQ38_009595 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
TQ38_009595 (lpdA)
00280 Valine, leucine and isoleucine degradation
TQ38_009595 (lpdA)
00310 Lysine degradation
TQ38_009595 (lpdA)
00380 Tryptophan metabolism
TQ38_009595 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
TQ38_009595 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nov04147
]
TQ38_009595 (lpdA)
Enzymes [BR:
nov01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
TQ38_009595 (lpdA)
Exosome [BR:
nov04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
TQ38_009595 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
GIDA
FAD_oxidored
FAD_binding_2
HI0933_like
NAD_binding_8
DAO
FAD_binding_3
Thi4
AlaDh_PNT_C
2-Hacid_dh_C
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
AXB76704
UniProt:
A0A2Z5EAX2
LinkDB
All DBs
Position
1:complement(1969476..1970891)
Genome browser
AA seq
471 aa
AA seq
DB search
MADTYDVIVLGSGPGGYVAAIRAAQLGLKTAIVERELLGGICLNWGCIPTKALLRSAEIL
HHMKHAKDYGLAADNITADLDAIVKRSRGVAKQLNQGITHLMKKNKITVHMGTGKLVAPG
KLEVTGDKGSETLSAKHIIIATGARARDLPKAKADGNRVWTYRHAMTPKEMPTKLLVLGS
GAIGIEFASFYNDMGVDVTVVEMLDRIVPVEDKDISVFLEKSLTKQGIKILTGAKAGDVI
PSDKGVTVKITPKGGKEEAQEFSHVIVAIGIVPNVENIGLEELKIEPDEKFFVKVDDYGR
TNVPGVWAIGDCVKGPWLAHKASHEGTTTAESIAKEMGNKEVHPHPLDRNNIPGCTYCHP
QIASVGLTEAKAKEAGYEVKAGTFPFIGNGKAIALGEAEGFVKTVFDAKTGELLGAHMIG
AEVTEMIQGYVVGKTLETTEAELMNTVFPHPTISETMHEATLAAYGRALHM
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
gtggctgatacttacgacgtcatcgttctcggttccggccccggcggctacgttgccgcg
atccgcgctgcgcagctgggcctgaagaccgccatcgtcgagcgcgaactgctcggcggc
atctgcctcaactggggctgtatcccgaccaaggcgctgctgcgctcggccgagatcctg
caccacatgaagcacgccaaggactacggcctggcggcggacaacatcaccgccgacctc
gacgccatcgtcaagcgctcgcgcggcgtcgccaagcagctcaatcagggcatcacgcac
ctgatgaagaagaacaagatcaccgtccacatgggcactggcaagctcgtcgcgcccggc
aagctggaagtgaccggcgacaagggcagcgaaaccctgtcggccaagcacatcatcatc
gccaccggcgcccgcgcccgcgacctgcccaaggcgaaggccgacggcaaccgcgtgtgg
acctatcgccatgcgatgacgccgaaggaaatgccgaccaagctgctggttctgggttcg
ggcgccatcggcatcgaattcgccagcttctacaacgacatgggcgttgatgtgacggtc
gtcgagatgctggaccggatcgtgccggtcgaggacaaggacatctcggtgttcctggaa
aagtcgctgaccaagcagggtatcaagatcctgaccggcgccaaggcgggtgacgtgatc
ccgtccgacaagggcgtcaccgtcaagatcacccccaagggcggcaaggaagaagcgcag
gaattcagccatgtcatcgtcgccatcggcatcgtgccgaacgtcgagaacatcggcctg
gaagaactgaagatcgagccggacgagaagttcttcgtcaaggtggacgattatggccgc
accaacgtgcccggcgtctgggcgatcggcgactgcgtgaagggcccctggctggcgcac
aaggccagccatgaaggcaccaccacggcagaatccatcgccaaggaaatgggtaacaag
gaagtccacccgcatccgctcgaccgcaacaacatcccgggctgcacctactgccacccg
cagatcgcgtcggtcggcctgaccgaggcgaaggccaaggaagcgggttacgaggtcaag
gccggaaccttcccgttcatcggaaacggcaaggccatcgcgctcggcgaggcggaaggc
ttcgtcaagacggtgttcgacgccaagaccggcgaactgctgggcgcccacatgatcggc
gcggaagtgaccgagatgattcagggctacgtcgtgggcaagaccctcgaaaccaccgag
gccgaactgatgaacacggtgttcccgcacccgacgatctcggaaacgatgcacgaggcg
acgctggccgcctacggacgcgcgctccacatgtga
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