Novosphingobium sp. P6W: TQ38_009670
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Entry
TQ38_009670 CDS
T05550
Name
(GenBank) molecular chaperone DnaK
KO
K04043
molecular chaperone DnaK
Organism
nov
Novosphingobium sp. P6W
Pathway
nov03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TQ38_009670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nov03019
]
TQ38_009670
03110 Chaperones and folding catalysts [BR:
nov03110
]
TQ38_009670
03029 Mitochondrial biogenesis [BR:
nov03029
]
TQ38_009670
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nov04147
]
TQ38_009670
Messenger RNA biogenesis [BR:
nov03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
TQ38_009670
Chaperones and folding catalysts [BR:
nov03110
]
Heat shock proteins
HSP70 / DNAK
TQ38_009670
Mitochondrial biogenesis [BR:
nov03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
TQ38_009670
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
TQ38_009670
Exosome [BR:
nov04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
TQ38_009670
Exosomal proteins of breast cancer cells
TQ38_009670
Exosomal proteins of colorectal cancer cells
TQ38_009670
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FtsA
FGGY_C
Motif
Other DBs
NCBI-ProteinID:
AXB76719
LinkDB
All DBs
Position
1:complement(1985642..1987549)
Genome browser
AA seq
635 aa
AA seq
DB search
MAKVIGIDLGTTNSCVAVMDGGKPKVIENSEGARTTPSIVAFAKDGERLIGQPAKRQAVT
NGNNTIFAVKRLIGRRFDDPVTRKDTELVPYTIVKGKNGDAWVQAGGEDYSPSQISAFTL
QKMKETAESYLGETVTQAVITVPAYFNDAQRQATKDAGQIAGLEVLRIINEPTAAALAYG
LDKQDGKTIAVYDLGGGTFDVSVLEIGDGVFEVKSTNGDTFLGGEDFDSKIVEWLAEKFK
AKENMDLKTDKLALQRLKEAAEKAKIELSSTATTEVNLPFITARMEGGATTPLHLVETIT
RSDLEKMVADLIQRTLEPCRKAIADAGLSAKDIDEVVLVGGMTRMPKVREVVKEFFGKEP
HTGVNPDEVVAMGAAIQAGVLQGDVKDVLLLDVTPLSLGIETLGGIMTKMIDRNTTIPTK
KSQVYSTAEDNQQAVTIRVFQGEREMAQDNKMLGQFDLVGIPPSRRGVPQIEVTFDIDAN
GLVNVSAKDKGTGKEQQIRIQASGGLSDSDIDQMVRDAEKFAEEDKKRRESAEARNQADS
LVHATEQQIAENGEKIDAALKAEVEAAIAATKTALAGDDAAEINAKAQELTQVAMKMGQS
IYEKEQASAASPEAAKAGDDDVVDAEFSEVDENKG
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagtaattggtatcgatcttggcaccaccaacagctgcgtcgccgtcatggac
ggcggcaagcccaaggtcatcgagaattccgaaggcgcccgcacgacgccctcgatcgtc
gcattcgccaaggatggcgagcgtctgatcgggcagccggcaaagcgccaggccgtcacc
aacggcaacaacacgatcttcgcggtgaagcgcctcatcggccgccgcttcgacgatccg
gtgacccgcaaggacaccgaactggtcccttacaccatcgtcaagggcaagaacggcgat
gcctgggtccaggctggcggcgaagactactcgccttcgcagatctcggctttcacgctg
cagaagatgaaggaaaccgctgagtcctatctgggcgagacggtcacgcaggcggtcatc
accgtgcctgcctacttcaacgacgcacagcgccaggccaccaaggacgccggccagatc
gccggtctcgaagtgctgcgcatcatcaacgagccgaccgcggctgcgctggcttacggc
ctcgacaagcaggacggcaagaccattgctgtctatgaccttggcggcggcaccttcgac
gtgtcggtcctggaaatcggcgacggcgtgttcgaggtcaagtcgaccaacggcgacacc
ttcctgggcggcgaagacttcgattcgaagatcgtcgaatggctggccgagaagttcaag
gccaaggaaaacatggacctgaagaccgacaagctcgctcttcagcgcctgaaggaagcg
gctgaaaaggccaagatcgagctgtcgtccaccgcgacgaccgaggtcaacctgcccttc
atcaccgcacgcatggaaggcggcgccaccactccgctgcacctcgtcgagacgatcacc
cgctccgacctggagaagatggtcgccgacctgatccagcgcactctggaaccctgccgc
aaggcgatcgccgatgccggtctttcggccaaggacatcgacgaagtcgtgctcgtgggt
ggcatgacccgcatgcccaaggtgcgcgaagtcgtgaaggagttcttcggcaaggaaccg
cacaccggtgtgaaccctgacgaagtcgtcgccatgggcgcggcgatccaggccggcgtg
ctgcagggcgacgtcaaggacgtgctgctgctcgacgtgaccccgctgtcgctgggcatc
gagacgctgggcggcatcatgaccaagatgatcgaccgtaacacgacgatcccgaccaag
aagagccaggtctactcgaccgccgaggacaaccagcaggcggttacgatccgcgtgttc
cagggcgagcgcgagatggcgcaggacaacaagatgctcggccagttcgacctcgtcggc
attccgccgtcgcgccggggcgtgccgcagatcgaagtgaccttcgacatcgacgccaac
ggcctcgtgaacgtgtccgccaaggacaagggcacgggcaaggaacagcagatccgcatc
caggcctcgggcggcctttcggacagcgacatcgaccagatggttcgcgatgccgagaag
ttcgccgaagaggacaagaagcgccgcgaatcggccgaggcccgcaaccaggccgacagc
ctcgtccacgcgaccgagcagcagatcgccgagaacggcgagaagatcgacgccgctctg
aaggctgaagtcgaagccgcgatcgccgcgaccaagaccgcgcttgccggtgacgatgct
gcggaaatcaacgccaaggctcaggaactgacccaggtggcgatgaagatgggccagtcc
atctacgagaaggagcaggcttcggctgcttcgcctgaagcggccaaggccggtgacgac
gatgtggtcgatgccgaattctcggaagtcgatgaaaacaagggctga
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