Novosphingobium sp. P6W: TQ38_009900
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Entry
TQ38_009900 CDS
T05550
Name
(GenBank) DNA mismatch repair endonuclease MutL
KO
K03572
DNA mismatch repair protein MutL
Organism
nov
Novosphingobium sp. P6W
Pathway
nov03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TQ38_009900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nov03400
]
TQ38_009900
DNA repair and recombination proteins [BR:
nov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Molecular matchmaker
TQ38_009900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
AXB76760
LinkDB
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Position
1:complement(2033290..2035104)
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AA seq
604 aa
AA seq
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MPTIRRLPEHLVNRIAAGEVVERPAAALKELVENAIDAGSTEITVRLASGGLDMIEVTDD
GCGMRSDEIALALERHATSKLPDEQIELVATLGFRGEALPSIGSVARLTIESRPRDAQEG
WKRVVDHGVVTSDAPAALPPGTRIRVEDLFGKVPARRKFLRSSRSEYAACLDVVRRLAMA
RPDVGFIMEHDGRRVLAVQPREELAARVARLIARELSEDGVLIEAERGNARLTGVAGLPT
YNRGVADHQYLFVNGRPVKDRLLVGAVRGAYSDMLARDRHAVLALFLEIPPEDVDVNVHP
AKTEVRFRDPAFVRGFLVGALRHALEGAGQKSAQPAATAAMNMWQVEPATPAPTPSLGSL
FAREYGGSPQRYEGSRVSEAGTVWRSYEAEVMAQPSSRAEPAAETTAEDLRYPLGVARGQ
VSNTYIVAEAEDGLVIVDQHAAHERLVLERLKAAGAEEAMNRSQALLLPEVVELEEPACD
ALEDKIGDLARHGLVLERFGPCAMLVRAVPSVLSKSDVTALVRDVADDLARNGDALLLGE
KLDLVLATMACHGSVRAGRALSVAEMNALLREMERTPRSGQCNHGRPTWVKLAHQDIEKL
FGRK
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcctacgatccgccgcctgcctgaacacctggtcaaccgcatcgccgccggcgaagtg
gtcgagaggccggcggctgcgctcaaggaactggtcgagaatgcgatcgacgcgggttct
acggaaatcaccgtgcgcctcgcctcgggcggcctggacatgattgaggttaccgacgac
ggctgcggcatgcggtccgacgagatcgctctggcgctggaacgccatgccacgtcgaaa
ctgcctgacgaacagatcgaactcgttgctacgcttggttttcgcggcgaggcgctgccc
tcaataggctcggttgcgcggctgaccatcgaaagccggccccgcgatgcgcaggaaggc
tggaagcgggtggtcgaccatggcgtggtcacatccgatgcccctgccgccttgccgccg
ggcacgcgcatccgcgtggaggacctgttcggcaaagtgcctgcgcggcgcaagttcctg
cgctcatcgcgttcggagtatgctgcgtgtctagacgtggttcggcgcctggcgatggca
aggcccgatgtcggtttcatcatggagcatgatggtcgccgtgtgctggcggttcagccg
cgcgaagaactggcggcgcgggttgcccgcctcatcgcccgtgaactgtccgaggacggc
gtcctgattgaggctgaacgtggcaacgcgcgcctgaccggcgtagcgggcctgcctacc
tacaaccggggcgtcgccgatcaccagtatctcttcgtcaacgggcgtccggtgaaggac
cgtttgttggtgggcgcggtgcgcggggcttactcggacatgctcgcgcgggaccgtcat
gcggtgctggcgttgttccttgaaattccgcctgaggatgtcgacgtcaacgtccatccc
gccaagaccgaagtgcgtttccgtgacccggcttttgtgcgtggtttcctcgtcggggcc
ttgcgccatgcgctggaaggcgccgggcagaagagcgctcagcctgctgccaccgcagcg
atgaatatgtggcaggtcgagccggcaacgcccgcgccgacaccgtcgctcggttcgctg
ttcgcgcgggaatatggtggttcacctcagcgatacgaaggctcgcgggtgtccgaagcg
gggactgtttggcgatcctacgaagccgaagtcatggctcagccttcctcgcgcgccgaa
cccgctgcggagacgaccgcggaggacttgcgctatccgctgggcgttgcgcgtgggcaa
gtgtccaatacctatatcgtcgcggaagcggaagacggcctcgtcatcgtcgaccagcac
gctgcgcatgaacgccttgttctggagcgcctcaaggcagcgggcgcggaagaggcgatg
aaccgctcacaggcgctgcttttgccggaggtggtcgaactggaagagccggcctgtgac
gcgctggaggacaagatcggcgatctcgcccgccacggcctcgtgctcgaacgtttcggg
ccttgcgcgatgctggtgcgggcggtgccttcggtattgtcgaaaagtgatgtgaccgcg
ctggtgcgcgatgtcgcggatgatctcgcccgcaacggcgacgccctgcttctgggcgaa
aagctggacctcgtgctggcgacgatggcttgccacgggtcggtgcgggcgggccgcgcg
ctgtcagttgccgagatgaatgcgctgctgcgtgaaatggagcgcacgccgcgttcgggg
caatgcaaccatggccgccccacgtgggttaagcttgcccatcaggacatagaaaaactg
ttcgggcgaaagtga
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