Novosphingobium sp. P6W: TQ38_010610
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Entry
TQ38_010610 CDS
T05550
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
nov
Novosphingobium sp. P6W
Pathway
nov03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TQ38_010610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nov03019
]
TQ38_010610
Messenger RNA biogenesis [BR:
nov03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
TQ38_010610
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Haem_oxygenas_2
Motif
Other DBs
NCBI-ProteinID:
AXB76890
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All DBs
Position
1:2169156..2169638
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AA seq
160 aa
AA seq
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MNDFSSLPYRPCVGVMLVNADGKVFVGKRIDTREGDWWQMPQGGVDDGEDLKAAAFRELW
EETGVTQEHVKLLSQTREELLYDLPEELLGKLWKGKYRGQRQHWFLARFDGSDDGIDLEA
HKPAEFCDWKWVDAELLPDLIVPFKKRVYRAVLEEFRALI
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacttttcgtccctgccctatcgcccctgcgtgggtgtcatgctcgtcaatgcc
gacggcaaggttttcgtcggcaagcgaatcgacacgcgcgaaggtgactggtggcagatg
ccccaaggcggcgtagacgatggcgaagacctcaaggctgcggcgttccgcgaactgtgg
gaagaaaccggcgtcacccaggaacacgtcaagctgctctcccagaccagggaagaactg
ctctacgacctgcctgaggaactgctcggcaagctgtggaagggcaaatatcgcggccag
cgccagcactggttcctcgcccgcttcgacggcagcgatgatggcatcgaccttgaagca
cacaagccggccgagttctgcgactggaaatgggtggacgccgaactgctgcccgacctc
atcgtaccgttcaagaagcgggtctaccgcgctgttctggaagaatttcgcgcactgatc
tga
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