Novosphingobium sp. P6W: TQ38_010870
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Entry
TQ38_010870 CDS
T05550
Name
(GenBank) penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
nov
Novosphingobium sp. P6W
Pathway
nov00550
Peptidoglycan biosynthesis
nov01100
Metabolic pathways
nov01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
TQ38_010870
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
TQ38_010870
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
nov01003
]
TQ38_010870
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nov01011
]
TQ38_010870
Enzymes [BR:
nov01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
TQ38_010870
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
TQ38_010870
Glycosyltransferases [BR:
nov01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
TQ38_010870
Peptidoglycan biosynthesis and degradation proteins [BR:
nov01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
TQ38_010870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
AXB76933
UniProt:
A0A2Z5EB65
LinkDB
All DBs
Position
1:complement(2228386..2230923)
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AA seq
845 aa
AA seq
DB search
MTDANNPGEQPSEDASFRIRREASGGFAAIGRQWRQRKWLRRFSYLCLAGLVGLAGFWIV
LTRDMPDANKLLEYQPPLPTMVRGMDGEIVYSYARERRVQLRFVDFPKSMVNAFLSAEDR
TFWTHGGVDIGGLAGAVVDYAAKFGTGARAKGGSTITQQVAKNILIGDEYSVTRKLKEMV
LARRIEGVLTKQQILELYLNEIPLGRRSFGVQAASRAYFDRDVEDLTLSQSAFLAILPRA
PEVYGRKKNEDRAIERRNWVLDQMVRNGWATPQAAAAAKAEPLGLVTQRGSDFDPANGYF
VEEVRRRLIDKYGEKAEDGPNSVYAGGLWVRTSLDSEMQKAVREALRGGLLRYHGNRGWA
GPIAHLNDLENWQSQLVVANKTMDYKDWRIGVILDGSSTDGGSGRIGFSDGNIATLTGVP
ARAKAGDLVAAAPVTAGSWALRAIPEVSGGMVIEEPASGRIVAMQGGFDAGIDSFNRAVQ
AERQPGSTIKPFVYATALQNGMTPATQVLDGTFCVFQGANLGNKCFKNFGGEGGAGSHTM
RWGLEQSRNLMTVRIANDTGMARVTRTFHNVGIGDYQNYLSFALGAGETTVARMINAYAA
LANNGVQFSGSVIDYVQNRSGKVIWRADKSRCDTCNMSQWDGKPMPRIARKGKQVLDADT
AYQVVHMLEGVVQRGTAVRLRDLKLPLFGKTGTTNGPTDVWFMGGNQDYVGGVYMGYDAP
RSLGGYAQGGRIAAPIFKDVVEATRNRWGQQPFVAPSGIRMVRIDRVTGKRVMGVEPGDD
PKAAVIWEAFKPDTEPRQYTAEDEFSRRRDALVSQIRGARDARAAAEANASGDAGNFAEQ
QGGVY
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgcgaataatcccggcgagcagccgtccgaagacgcgagcttccgcatccgc
cgcgaggcttccggcggttttgccgcgattggaaggcagtggcggcagcgcaagtggctg
cggcgtttcagctacctgtgtctggcgggccttgtcggcctcgccggtttctggatcgtg
ctgacgcgtgacatgccggatgcgaacaagctgctcgaatatcagccgccgttgccgacg
atggtgcgcgggatggacggcgagatcgtctattcctacgcccgcgagcggcgcgtgcag
ctgcgtttcgtcgattttccgaaatcgatggtgaatgcttttctttcggccgaggaccgg
actttctggactcacggcggcgtcgatattggcggtctcgccggtgcggtggttgactat
gccgccaagttcggcactggcgcgcgcgccaagggcggttcgaccatcacccagcaggtc
gccaagaacatccttatcggcgacgagtattcggttacccgcaagctcaaggaaatggtc
ctcgcgcgccgcatcgaaggtgtgctgaccaagcaacagatccttgaactctacctcaac
gaaattccgctcggccgtcgttcattcggcgtgcaggctgcatcacgcgcctatttcgac
cgcgatgtggaggacctgacgctcagccagagcgcgttcctcgccattctgccgcgcgct
cccgaagtttacgggcgcaagaagaacgaagaccgggcgatcgagcgccgtaactgggtg
cttgaccagatggtccgcaacggctgggcgaccccgcaagcggccgctgccgccaaggcg
gagccgcttggcctcgtgactcaacgcggcagcgacttcgatcccgccaatggctacttc
gtcgaggaagtgcgccgccgcctgatcgacaagtacggcgagaaggcggaggacggcccg
aacagcgtttacgccggtggcctgtgggtgcgtacctcgctcgattccgaaatgcagaag
gcggtgcgcgaagcactgcgcggaggattgctgcgctatcatggcaaccgtggctgggca
gggccgatcgcccatctcaatgatctcgaaaactggcagtcgcagctggtcgtcgccaac
aagacgatggactacaaggactggcgcatcggcgtcatcctcgatggttcttcgaccgac
ggaggttcgggccggatcgggttctccgatggcaacatcgcgacgctgaccggcgttccg
gcgcgggccaaggcaggcgatctggttgccgctgcgccggtgacggcggggagctgggcg
ctgcgcgcgatccccgaggtttccggcggcatggtcatcgaggaacctgccagcgggcgc
atcgtcgccatgcagggcggtttcgatgccggcatcgattcgttcaaccgcgccgtccag
gccgaacgtcagccaggctcgacgatcaagcccttcgtctacgcgaccgcgctccagaac
ggcatgaccccggcgacccaggtgctcgacggtacgttctgcgtgttccagggcgcaaat
ctcggcaacaagtgcttcaagaacttcggcggggagggcggcgcaggcagccacaccatg
cgctggggcctggaacagtcgcgcaacctgatgaccgtgcgcatcgccaacgatacgggc
atggcgcgcgttacccgcacgttccacaatgtgggtatcggcgattaccagaactacctc
tcgttcgcgctgggcgcgggcgagactaccgtggcgcgcatgatcaacgcatatgccgcg
ctggccaacaacggcgtgcagttctcgggctcggtcatcgattatgtccagaaccgcagc
ggcaaggtgatctggcgcgcggacaagagccgctgcgacacctgcaacatgtcccagtgg
gatggcaaaccgatgccgcggatcgcgcgcaagggtaagcaggtgctcgacgccgacacc
gcctaccaggtcgtccacatgctggagggcgtggttcagcgcggcaccgctgtgcgtctg
cgcgaccttaagctgccgctgttcggcaagacgggtacaaccaacggtccgaccgacgtg
tggttcatgggcggcaaccaggactatgtgggcggcgtctatatgggatacgatgcacct
cgctcgctgggcggttatgctcagggtggccgcatcgctgcgccgatcttcaaggacgta
gtggaagccacccgtaaccgttgggggcagcagccgttcgtcgctccttcgggcatccgc
atggttcgcatcgatcgtgtgaccggcaagcgggtcatgggcgttgagcccggcgacgat
ccgaaggctgccgtaatctgggaagccttcaagccggacacggaaccgcgccagtacact
gccgaggacgaattcagccgccgccgcgacgcgctggtatcccagatccggggcgcgcgg
gatgcgcgcgccgcagcagaggccaatgcctctggcgacgccgggaactttgcggagcag
cagggcggcgtatactga
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