Novosphingobium sp. P6W: TQ38_012115
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Entry
TQ38_012115 CDS
T05550
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
nov
Novosphingobium sp. P6W
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
nov03029
]
TQ38_012115 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nov02000
]
TQ38_012115 (bamA)
Mitochondrial biogenesis [BR:
nov03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
TQ38_012115 (bamA)
Transporters [BR:
nov02000
]
Other transporters
Pores ion channels [TC:
1
]
TQ38_012115 (bamA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POTRA
Omp85
POTRA_1
Motif
Other DBs
NCBI-ProteinID:
AXB78196
LinkDB
All DBs
Position
1:complement(2514581..2517232)
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AA seq
883 aa
AA seq
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MVRWTDGGRASQLAAVLMGTTILAGVPADALAQAAPKASASKASTSKTAAPKATAPKAAP
ASPVADPDASAVPIVTIQVKGSERLEPQTVLSYIKMRVGQPYTKASADAALKDLYSTELF
KDVQINNDGGVVVIQVQENPVVNRIILEGNKRIKDDKILPEIKVSPRQIFTRSKIRADVA
RIIELYKRQGRYAATVEPKMVSLDQNRVDIVFEITEGDKSKVRQINIIGNEHFSDGELRS
EMVTKQARFTRLFSSGTSYDPDRMAFDQQKLRQFYLTQGYADFRVVSAVAELTPDKKDFI
ITYVVEEGQRYKFGDVKVESQLRDFDGEKMAKNLVMHKGDWYNAKQVEDTIEGLNETAGA
FGYAFADVRPQYDRDKENLTMGLTFVIQEAPRVYVERIDINGNTLTQDKVIRREFRLAEG
DAFNSLQVKRSTNRIKSLGYFQEKFEVEQKPGAADDRIILEANVEEKPTGELQLSAGFSS
LESFIFQASIRQRNFRGRGQTVGLSGSLSRYSKSVEASFVEPYLFDKNISLGVDIYRRDY
NSFNFQNSDRRTTYEQSTTGFQVRAGVPLTEYLTAVGRYTLNYDDVGLGSQYFTADGACD
PLVAGRYLCDAIGKRLSSIVGLSLIYDTLDNRQRPTRGFTASVNVDFAGLGGDVKYARLR
GNASKFFNLGKGFIFSLSAEGGVIKGLAGDNVRLTDRFYLGEPQIRGFGIRGVGPRVLRK
YITDGVVSTKRSDWQDDALGGNYYYMGRAEMEIPLGSGAREMGLRPSIFADIGAVWSVKQ
PALSQCETGCTPLYTQTNADGSTTTTTSATNSTTGQNNVATGNFQYNFIEEFVGDTWKPR
VAVGIGVNWNSPFGPFRIDVSRALLKEDGDRSKTFTFNVGTQF
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggttcgctggactgacggaggccgtgcctcgcagctcgcggcggtgctgatggggacc
acgatcctcgcgggtgtccccgccgatgctttggcccaggcagcgcccaaggcctcggct
tcaaaggcttcgacttcgaagaccgctgcgccgaaggctactgcgccgaaggcagctccg
gcatccccggtggccgatcccgatgccagtgcggtgccgatcgtgaccatccaggtcaag
ggatcggagcgtctcgagccgcagacggtgctgtcctatatcaagatgcgcgttggccag
ccttacaccaaggccagtgccgacgccgcgctcaaggacttgtactcgaccgagctgttc
aaggacgtccagatcaacaacgacggtggtgtcgtggttattcaggtccaggaaaacccg
gtcgtcaaccgcatcatccttgagggcaacaagcgcatcaaggacgacaagatcctgccc
gagatcaaggtctcgccgcgccagatcttcacgcgttccaagatccgcgccgacgtcgcg
cgcatcatcgagctttacaagcgtcagggccgctacgccgcgacggtagagccgaagatg
gtctcgctcgaccagaaccgcgtcgacatcgtcttcgagatcaccgagggcgacaagtcc
aaggttcggcagatcaacatcatcggcaacgagcacttctcggatggcgagctgcgcagc
gagatggtgaccaagcaggcgcgtttcacccgcctgttcagctccggcaccagctacgat
cccgaccgcatggctttcgaccagcagaagctgcgtcagttctacctgacgcagggttat
gccgatttccgcgtggtttcggccgtggccgaacttacgccggacaagaaggacttcatc
atcacttacgtggtggaggaaggtcagcgttacaagtttggcgacgtcaaggtcgagagc
cagctgcgcgacttcgatggcgagaagatggccaagaacctcgtcatgcataagggcgac
tggtacaacgccaagcaggtcgaagacacgatcgagggcctgaacgaaaccgccggtgca
ttcggctacgccttcgcagacgtgcgtccgcagtatgaccgcgacaaggaaaacctcacc
atggggttgaccttcgtgatccaggaagcgccgcgcgtctatgtcgagcgtatcgacatc
aacgggaacacgctgacccaggacaaggtgatccgccgcgagttccgccttgccgaaggc
gatgcgttcaactcgctgcaggtcaagcgttcgaccaaccgcatcaagtcgctcggctac
ttccaggagaagttcgaagtcgagcagaagcccggcgccgccgacgaccgcatcatcctg
gaagccaatgtcgaggagaagccgaccggcgaactccagctttcggccggtttctccagt
cttgaaagcttcatcttccaggcctcgatccgccagcgcaacttccgtgggcgcggccag
acggtgggtctgtcgggcagcctttcgcgctattccaagagcgtcgaggcgagcttcgtc
gagccatatctgttcgacaagaacatctcgctgggcgtcgacatctatcgccgcgattac
aacagcttcaatttccagaactcggatcgccggacgacctacgagcagtcgaccaccggt
ttccaggtccgtgccggtgttccgctgaccgagtacctgaccgccgtgggccgttatacg
ctcaactacgacgacgtcggtctgggcagccagtacttcactgccgacggcgcctgcgat
ccgctggtcgcgggccgctatttgtgcgacgcaatcggcaagcgcctgtcctcgatcgtc
gggctttcgttgatctacgacacgctcgacaaccgccagcgtccgacgcgcgggttcacc
gcctccgtcaacgttgatttcgcgggccttggcggcgacgtgaagtatgcacgcctgcgc
ggcaacgcgtcgaagttcttcaatctgggcaagggcttcatcttctcgctctcggctgag
ggcggtgtgatcaagggtctggccggcgataacgtgcgcctgaccgatcgtttctacctt
ggcgagccgcagattcgcggcttcggtatccgcggtgtcggtccgcgcgttttgcgcaag
tacatcaccgacggcgtggtctccaccaagcgcagcgattggcaggacgatgcgctgggc
ggcaattactactacatgggccgcgccgaaatggagatcccgctgggttcgggcgcgcgt
gagatgggcctgcgcccctcgatcttcgctgacatcggcgcggtgtggagcgtgaagcag
cctgctttgagccagtgcgagacgggctgtaccccgctctacacgcagactaacgccgac
ggttcgacgacgaccacgacttccgccaccaacagcactaccggccagaacaacgtcgcc
accggcaacttccagtacaacttcatcgaggagttcgtcggtgatacctggaagccgcgc
gtcgccgtcggtatcggcgtgaactggaactcgcctttcggcccattccgcatcgatgtc
tcgcgcgcactccttaaggaggatggcgaccgctccaagacctttactttcaacgtggga
acacaattctga
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