Novosphingobium sp. P6W: TQ38_012390
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Entry
TQ38_012390 CDS
T05550
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
nov
Novosphingobium sp. P6W
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nov03009
]
TQ38_012390
Enzymes [BR:
nov01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
TQ38_012390
Ribosome biogenesis [BR:
nov03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
TQ38_012390
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AXB77192
UniProt:
A0A2Z5EBY1
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All DBs
Position
1:2564462..2566234
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AA seq
590 aa
AA seq
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MSKPPSKSGGPGRGRNSGGSSRDGSSFGSSSSGGDRGRSPRSGGGSDGGGSRYNGGSRGD
GPRGGGGSGGSQGGGSRYNGGSRGDSPRGDAARGGGRGTYSREGAPREGGREGGRDSSYR
SVGRDEAARGGGSRGGYTPRDGGGRSGAREDAPRGGGQRGTYSRDGGARSDAPRGGPRDS
FPRDGGSRGAPRDAAPRGSAPRDDAPRSSGPRDYSPRGTYSRDSAPRDGAPRGGGGRSDG
PRATYSRGAPRDDRYGDKRENRYGGGGRSDGPRTGGRPIARPGPAPRAKAPTAKDPTLPA
REGERIAKLLARAGVASRREVERMIIEGRVRLGDDLIETPSTVLTSLAGVTVDGNRVAAP
EGTRLFLFHKPSGLITAERDMAGRPTIYSALRNALPDGAGRVMPIGRLDLNTEGLLLLTN
DGEFKRQLELPATGVPRTYRARTFGDITQSRLEELMEGIEVDGVIYGRIDANMERRTGRN
QWIEMTLTEGKNREVRRVLEALDLQVSRLLRVSYGPFRLGDLPKGAAGEVSQKDLETFRR
TLKENEAREANARAIDERKAAVAGDEAIGATENIDTNKDIPTNEAEEAED
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccacccagcaagtccggcggcccaggtcgcggccgcaattccggcggctca
tcccgcgatggttcctctttcgggagttcctcgtccggaggagatcgcggaagatcgccc
cgcagcggcggcggctccgacggcggcggatcacgctataacggcggttcgcgcggcgat
ggcccgcgtggcggcggcggtagcggcggctcccagggtggtggctcgcgctacaacggc
ggttcgcgcggcgattctccgcgcggtgacgcagctcgtggcggcggtcgcgggacgtat
tcgcgcgaaggcgcgccccgtgaaggtggccgtgaaggtgggcgcgacagcagctaccgc
agcgtcggccgcgatgaagcagcacgcggcggcggttcgcgcggcggctacaccccgcgc
gatggcggtggacgcagcggcgcacgcgaggacgcccctcgcggcggcggtcagcgcggc
acctactcgcgcgatggcggcgctcgcagcgatgcgcctcgcggtggtcctcgcgacagt
ttcccccgtgacggtggttcgcgcggcgctccgcgtgacgccgctcctcgcggcagcgcc
cctcgcgacgacgcgccccgcagcagcggcccgcgcgattactcaccgcgcggcacctac
tcgcgcgattcggcgccccgtgacggcgctccccgtggtggtggtggccgcagcgatggt
ccgcgcgctacttactcgcgcggcgccccgcgtgacgaccgctacggtgacaagcgcgaa
aaccgctacggcggcggcggacgcagcgacggcccgcgcaccggcggccgcccgatcgcc
cggcccggcccggccccgcgcgccaaggcgccgacagccaaggaccccacgctccccgcc
cgcgaaggtgagcgtatcgccaagctgctcgcccgtgcgggcgtcgccagccgccgcgaa
gtggagcgcatgatcatcgagggccgcgtgcggctcggcgacgatctgatcgagacgccc
tccacggtgctgaccagccttgccggcgtcactgtcgacggcaaccgggtcgccgcgccg
gaaggcacgcgcctgttcctgttccacaagccttcgggcctgatcaccgccgagcgcgac
atggccggccgcccgacgatctacagcgcgcttcgcaacgccctgccggacggcgcggga
cgggtcatgccgatcggccgactcgatctcaacaccgaaggcctgttgctgctgaccaac
gacggtgagttcaagcgccagctggaactgcccgccaccggcgtgccgcgcacctaccgc
gcgcgcactttcggcgacatcacgcagagccgcctggaagagctgatggaaggcatcgag
gtcgacggcgtgatctatgggcggatcgacgccaacatggagcggcgcactgggcgcaac
cagtggatcgagatgaccctgaccgaaggcaagaaccgtgaagtccgccgcgttctggaa
gcgctggacctgcaggtcagccgtctgctgcgcgtgtcctacggcccgttccgcctgggc
gacctgcccaagggcgcggccggcgaagtgtcgcagaaagacctcgaaaccttccgccgc
actttgaaggagaacgaggcgagggaagccaacgcccgggccatcgacgagcggaaggca
gccgtggctggtgacgaggctatcggcgcgaccgagaatatcgacacaaacaaggatatc
cccacaaacgaggctgaggaggcggaggattga
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