Novosphingobium sp. P6W: TQ38_012405
Help
Entry
TQ38_012405 CDS
T05550
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nov
Novosphingobium sp. P6W
Pathway
nov03420
Nucleotide excision repair
nov03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TQ38_012405
03430 Mismatch repair
TQ38_012405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nov03400
]
TQ38_012405
Enzymes [BR:
nov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TQ38_012405
DNA repair and recombination proteins [BR:
nov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TQ38_012405
MMR (mismatch excision repair)
Other MMR factors
TQ38_012405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
PcrA_UvrD_tudor
DUF3553
AAA_11
RA_3
Motif
Other DBs
NCBI-ProteinID:
AXB77195
UniProt:
A0A2Z5EBZ1
LinkDB
All DBs
Position
1:2567634..2569886
Genome browser
AA seq
750 aa
AA seq
DB search
MIGGLNEPQREAVLTTEGPVLMLAGAGTGKTAALTTRLAHLVRERLAWPSEILCVTFTNR
AAREMRERVGHMIGPAVEGMPWLGTFHSVAAKMLRRHAELVGLQSNYTIIDTDDQLRLLK
QLIVAENVDEKRFPAKQLAGCIDRWKNRGLNPADLDAGENEAYANGKGRKFYQLYQDRLK
AVNACDFGDLLLHMLNILRTHRDVLDQYQQRFKYVMVDEYQDTNQVQYLWLRLIAQGRQN
ICVVGDDDQSIYSWRGAEVANILRFEKDFPGAKVIKLEQNYRSTPQILAAASGLIDENTQ
RLGKTLWTERHAGDKVRVIGVWDGPEEARRIGEDIERLEREGAPLDQVAILVRAQYQTRE
FEDRFISIGLKYRIVGGFRFYERAEIRDALAYLRVIAQPQDDLAFERIYNAPKRGLGAKA
LEALHTLARRQNIPLARAAIEIADSDELPARPRNTFLALMRDFARWRDLSGTEKPSDLLR
TVMDECGYTDALQAEKSAEATGRLENLAELARAMEEYDTLGEFLEHVSLVMDNEKSADDE
KVTIMTMHAAKGLEFDNVFLPGWEEGVFPSQRALDEGGLASLEEERRLAYVAITRARRKC
TIVHAANRRIYGQWTSSIPSRFIAELPEEHVDSETTLSGGASLWRAQWSEHGDPFAEVAR
TQPSRIVTRGPGWQRAAAKEFDTKPKRVAESTRSAASFAAKPRGDISVGDRVFHEKFGYG
SVAAQEGNKLEIDFEHSGRKRVIDSFVKPA
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgatcggcggcctgaacgagccgcagcgcgaggccgtgctgaccaccgaaggtccggtg
ctgatgctggcaggcgccggcaccggcaagaccgccgcgctgaccacccggctggcccat
ctggtgcgcgagcgccttgcctggcccagcgaaatcctctgcgtcaccttcaccaaccgg
gcggcgcgcgaaatgcgcgaacgcgtcggccacatgatcggcccggcggttgagggaatg
ccgtggctgggcacgttccattcggtcgccgccaagatgctgcgccgccacgccgaactg
gtcggcctgcagtcgaactatacgatcatcgacaccgacgaccagctgcgcctcctcaag
cagttgatcgtcgccgagaacgtcgacgaaaagcgcttcccggccaagcagctcgccggc
tgcatcgaccgctggaaaaaccgcggcctgaaccccgccgacctcgacgcgggcgagaac
gaggcttacgccaacggcaagggcaggaagttctatcagctttaccaggaccgcctgaag
gccgtgaacgcctgcgatttcggcgacctgctcctgcacatgctgaacatcctgcgcacc
caccgcgatgtgctggaccagtaccagcagcgcttcaaatacgtcatggtggacgaatat
caggacaccaatcaggtccagtacctgtggctgcgcctgatcgctcagggccgccagaac
atctgcgtggtgggcgacgacgaccagtcgatctattcgtggcgcggcgccgaagtggcc
aatatcctgcgcttcgagaaggactttcccggcgccaaggtcatcaagctggagcagaac
taccgctccactccgcaaattctcgccgccgcatcgggccttatcgacgagaacacccag
cgcctcggcaagaccctttggaccgagcggcatgcgggcgacaaagtgcgcgtcatcggc
gtctgggacggccccgaggaagcacgccgcatcggtgaggacatcgagcggctggaacgc
gaaggcgccccgctggaccaggtcgccatcctcgttcgtgcgcagtaccagacgcgcgaa
ttcgaggaccgcttcatctcgatcgggctgaaataccgcatcgtcggaggctttcggttc
tacgaacgcgccgaaatccgcgatgcgctggcgtacctgcgcgtcatcgcccagccgcag
gacgaccttgcgttcgagcggatctacaatgcccccaagcgcggcctcggtgccaaggcg
ctggaggcgctgcacaccctggcccgccgccagaacatcccgctagcccgcgccgcgatc
gagatcgccgacagcgacgaactgcccgcccgcccccgcaacaccttccttgccctgatg
cgcgatttcgcccgctggcgcgacctgtccggcaccgaaaaaccttcggacctgctgcgc
accgtgatggacgaatgcggctacaccgatgcgcttcaggcggaaaagagcgccgaggcg
accgggcgtctggaaaaccttgccgaactcgcccgcgccatggaggaatacgacaccctc
ggcgaattcctcgaacacgtcagcctcgtcatggacaacgagaaatcggcggacgacgag
aaggtcacgatcatgaccatgcacgcggccaagggcctggaattcgacaacgtgttcctg
cccggctgggaggaaggcgtgttcccctcgcagcgcgcgctcgacgaaggcggcctcgcc
agcctggaggaggaacgccgcctcgcttacgtcgcgatcacccgggcgcggcgcaagtgc
acgatcgtccatgccgccaaccggcgcatctacggccagtggaccagttcgatcccctcg
cgcttcatcgccgaactgcctgaggaacacgtcgacagcgaaaccacgctgtcgggcgga
gcctcgttgtggcgggcgcagtggtccgaacatggcgaccccttcgccgaagtcgcccgc
acccagccctcgcgcatcgtcacgcgcggccctggctggcagcgcgccgccgcgaaggag
ttcgacaccaagcccaagcgcgtcgccgaaagcacccgcagcgccgccagcttcgccgcc
aagcctcgcggcgacatttcggtgggcgaccgggtcttccatgagaagttcggctacggc
agcgttgccgcgcaggaaggcaataagctggaaatcgatttcgaacattccggccgcaag
cgagtgatcgacagtttcgtgaaaccggcctga
DBGET
integrated database retrieval system
