Novosphingobium sp. P6W: TQ38_012880
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Entry
TQ38_012880 CDS
T05550
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
nov
Novosphingobium sp. P6W
Pathway
nov00061
Fatty acid biosynthesis
nov00071
Fatty acid degradation
nov01100
Metabolic pathways
nov01212
Fatty acid metabolism
nov02024
Quorum sensing
nov04146
Peroxisome
Module
nov_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
TQ38_012880
00071 Fatty acid degradation
TQ38_012880
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
TQ38_012880
09145 Cellular community - prokaryotes
02024 Quorum sensing
TQ38_012880
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
nov01004
]
TQ38_012880
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nov04147
]
TQ38_012880
Enzymes [BR:
nov01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
TQ38_012880
Lipid biosynthesis proteins [BR:
nov01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
TQ38_012880
Exosome [BR:
nov04147
]
Exosomal proteins
Exosomal proteins of breast milk
TQ38_012880
Exosomal proteins of breast cancer cells
TQ38_012880
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
YqaJ
Motif
Other DBs
NCBI-ProteinID:
AXB77275
UniProt:
A0A2Z5EC74
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All DBs
Position
1:2670146..2671840
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AA seq
564 aa
AA seq
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MNDAATIGGVAPASPTQHADEMPPIAPRLLTDLLDHAVDAHGAWPAIDFMGRKWTYAEIG
ALSRRAARGLQDLGVVKGTRVGLCLPNTPYYVICYFAVLRIGAVVVNFNPLYTEREMAHQ
VEDSGCEVMIATDLALCLPKLEPLVGKTCLKRVIVCPFADVLPAFKRRAFLLFKRADIAH
EPHDLRYARFENLIARDAQPDPVERSPNDLAVLQYTGGTTGVPKGAMLSHANLAANSAQM
IAHVGHMPDKQERTLGVLPLFHVFALTTVLNYSVDTAAEMILLPRFEMKSFLATAKRTRP
TQFFGVPTLYTALNGQQLHGEFDNVRVCISGGAPLPLEVRREFETKTGVNVVEGYGLSEA
SPIIACNPLEGLVKDNSCGPAFPGTQLEIRDPNEPTRTCLPGEKGEVCARGPQIMKGYWN
RPEESEKTFIYGALRTGDIGYLDEDGYLFLVDRIKDVILCGGYNVYPRIIEEALYEHPMV
WEAAVIGVPDAYRGQSPKAFVALHPGDILDEETLLAFLRERLNKIEIPSSVEFRESLPKT
MIGKLSKKDLAAEETARRAGGQAG
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacgcggcgacgatcggcggggtcgcacccgcttcccccacccaacatgcggac
gagatgccgccgatcgcgccgcgtctgctgaccgacctgctcgaccatgccgtggacgcc
cacggcgcctggccggcgatcgacttcatgggccgaaagtggacttatgccgagatcggc
gcgctttcccggcgcgccgctcgcggactgcaggaccttggcgtggtcaagggcacgcgg
gtcgggctgtgcctgcccaatacgccttactatgtgatctgctacttcgcagtcctgcgg
atcggggcggtcgtggtgaacttcaacccgctctacaccgagcgcgagatggcccatcag
gtcgaggattccggctgcgaggtgatgatcgccaccgaccttgcgctatgcctgcccaag
ctggagccgctggtcggcaagacctgcctcaagcgcgtgatcgtctgccccttcgccgac
gtgctgcccgccttcaagcgccgcgccttcctgctgttcaagcgcgccgacatcgcccac
gagccgcacgacctgcgctatgcccggttcgagaacctcatcgcccgcgatgcccagcca
gatccggtggagcgatccccgaacgatctcgcggtgctgcaatataccggcggcaccacc
ggcgtgcccaagggggcgatgctcagccatgccaaccttgccgccaactcggcgcagatg
attgcccatgtcggccatatgcccgacaagcaggagcgcacgctgggcgtcctgccgctg
ttccacgtcttcgcgctgaccacggtgctgaactattcggtggacaccgccgccgagatg
atcctgctgccgcgcttcgagatgaaatccttcctcgccactgccaagcgcaccaggccc
acgcagttcttcggggtgcccacgctctacaccgcgctcaacggccagcagcttcacggc
gagttcgacaatgtgcgcgtgtgcatctcgggcggtgcccccctgcccctcgaagtgcgc
cgcgagttcgagacgaagaccggcgtcaacgtggtggaaggctacggcctgtcggaagcc
agcccgatcatcgcctgcaacccgctggaagggctggtcaaggacaactcctgcggcccc
gccttccccggcacccagctggaaatccgcgatccgaacgaacccacccgcacttgcctg
ccgggcgagaagggcgaggtctgcgcgcgcggcccgcagatcatgaaaggctactggaac
cgcccggaagaaagcgaaaaaacgttcatctacggcgccctgcgcacgggagacattggc
tatctcgacgaggacggctatctgttccttgtcgacaggatcaaggacgtgatcctgtgc
gggggctacaacgtctatccccggatcatcgaagaggcgctctatgagcatccgatggtc
tgggaggcggcggtgatcggcgtgccggatgcctataggggacagtcccccaaggcgttc
gtggcattgcatccgggggatatcttggacgaagaaacattgctcgccttcctgcgcgag
cggctgaacaagatcgagattccatcctcggtcgagtttcgggaatcgctgccgaagacg
atgatcggcaagctgtcgaagaaggacctcgctgccgaggaaacggcccggcgtgctggc
gggcaggcaggttga
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