Novosphingobium sp. P6W: TQ38_012895
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Entry
TQ38_012895 CDS
T05550
Name
(GenBank) TetR/AcrR family transcriptional regulator
KO
K22108
TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
Organism
nov
Novosphingobium sp. P6W
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nov03000
]
TQ38_012895
Transcription factors [BR:
nov03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
TQ38_012895
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_N
TetR_C_24
YopE
DUF8068
DUF1110
3HCDH_RFF
Motif
Other DBs
NCBI-ProteinID:
AXB78212
LinkDB
All DBs
Position
1:complement(2673136..2673837)
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AA seq
233 aa
AA seq
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MLQQKPHRRDGGLVRCGHGCLRSSTACAGCRFHCTKRSLQSRASARLTVKVATLREEEVL
AAAAALFAARGFAATSIRDIGERVGLLGGSLYHYIKSKDALFIRIHDRALQSAEDRIHAA
IAGLEDPSQALATACRVLLEIQLDPASLTMPLMNDFRAVPESVRVQLVERRDAFEQVFAD
LVEAAPLPAGVDRAVYRILLLTTLNTASTWYRPGRLSLDEVARQILRVYSVEG
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgctccagcagaaaccgcatcgtcgcgacggggggctggtacgctgcgggcatggttgt
ctccggtcttcgactgcttgcgctggatgcaggtttcattgtaccaaacgatcgttacaa
tcaagagcgagtgcccgtttgaccgtcaaagtcgccaccctgcgcgaagaggaagtgctg
gctgccgctgctgcgctgttcgccgcgcggggattcgctgcgaccagcattcgggacatc
ggcgagcgggtggggctgctgggcggatcgctctatcattacatcaagagcaaggacgcg
ctgttcatccgcatccatgatcgcgctctgcaatcggccgaggatcgcattcacgcggcg
atcgcggggttggaggatccttcgcaggccttggcgacggcgtgccgggtgctgctggaa
atccagctcgacccggcttcgttgacgatgcctttgatgaatgattttcgcgccgtgccc
gaaagcgttcgggtgcaactggtggaacggcgcgatgccttcgagcaggtgtttgccgat
ctggtggaggccgcgcccctgccggcgggcgtggaccgggcggtctatcgcatcctgctg
ctgaccacgctcaacaccgcgagcacctggtatcggccggggcgcctcagcctggacgag
gtcgcgaggcagatattgcgggtctattcggtcgaagggtag
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