Novosphingobium sp. P6W: TQ38_013650
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Entry
TQ38_013650 CDS
T05550
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nov
Novosphingobium sp. P6W
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nov03032
]
TQ38_013650
03400 DNA repair and recombination proteins [BR:
nov03400
]
TQ38_013650
Enzymes [BR:
nov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
TQ38_013650
DNA replication proteins [BR:
nov03032
]
Prokaryotic type
DNA Topoisomerases
TQ38_013650
DNA repair and recombination proteins [BR:
nov03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TQ38_013650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Choline_bind_3
Motif
Other DBs
NCBI-ProteinID:
AXB77410
UniProt:
A0A2Z5ECT3
LinkDB
All DBs
Position
1:complement(2842798..2843793)
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AA seq
331 aa
AA seq
DB search
MPRLKFADDTAAGTTRKPVRGNKWAYFDADGERIKDRDEIDRLNRIALPPAYANCWFSPD
PHVHLLATGYDARGRKQYRYHPDWREAREAMKFELCPRFGEALPALRERVEGDLKARNLG
RDRAIASVVALLDTGAIRVGNECYAKANKSFGATTLRSRHAKIERGTLLLRFKGKSGKLQ
EIACDDPSLVRCVRKMQDLPGQHLFQYLDEEGTPVPVHSHDVNEYLAETMGVTEQGEHFT
AKHFRTWAASTLAFTALWEQPGVSLRTLLDEVSQCLGNTPAIARKSYVHPAVIAAAKGDD
GAGTMPERLPRRTRWMSREERGLLEFLKTAD
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcctcaaattcgccgacgacacggcagcagggaccacccgcaagccggtacgc
ggtaacaagtgggcctatttcgacgccgacggcgagcggatcaaggaccgcgacgagatc
gaccggctgaaccggatcgccctgccgccggcttatgcgaactgctggttttcacccgac
ccccacgtccacctgctggcaaccggctatgacgcgcgcgggcgcaagcagtaccgctat
caccccgactggcgcgaggcgcgcgaggcgatgaagttcgagctgtgcccgcgcttcggc
gaggcgcttccggccttgcgtgagcgggtggagggcgacttgaaagcccgcaatctgggg
cgcgaccgggccatcgcctcggtggtcgcgctgctcgataccggcgcgatccgggttggc
aacgagtgctatgccaaggccaacaagagctttggcgccaccaccttgcgcagccgccat
gcgaagatcgagcgcggcacgctgctgctgcgcttcaagggcaagtcgggcaagctgcag
gagatcgcctgcgacgatccctcgctggtgcgctgcgtgcgcaagatgcaggacctgccc
ggccagcacctgttccagtatctggacgaggagggcaccccagttcccgtgcacagccac
gacgtcaacgaatacctggccgagacgatgggcgtcaccgaacagggcgaacacttcacc
gccaagcatttccgcacctgggcggcgagcacactggctttcaccgcgctgtgggagcag
cccggtgtttcgctgcgcaccctgctggacgaggtatcgcagtgcctgggcaatactccg
gcgatcgcgcgcaagtcctacgtccacccggcggtgattgcggcggcgaagggtgatgac
ggagcgggcacaatgcccgaacgcctgccgcgccgcacccgctggatgagccgcgaggag
cgcgggctgctggaattcctgaagactgcggactga
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