Novosphingobium sp. P6W: TQ38_014250
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Entry
TQ38_014250 CDS
T05550
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
nov
Novosphingobium sp. P6W
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nov02000
]
TQ38_014250
Transporters [BR:
nov02000
]
Other transporters
Pores ion channels [TC:
1
]
TQ38_014250
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AXB77521
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All DBs
Position
1:complement(2980851..2983373)
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AA seq
840 aa
AA seq
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MKILKSFALAASVSLIPITAAHAEAAADAAADAAAEVEGSAIIVTGARGQTQRSVADSPV
PVDVIGPAELKSTGRTGLKEILGNIIPSLTMPALGGGGTSASVRPISIRGLSGDYVLVLV
NGKRRHTTSLINNLSRISGGSTPVDIDLIPTSGVGHIEVLRDGAAAQYGSDAISGVINII
LDNTAHGGDLSLTGGQQYAGGGELVQLSGSYGAPLGDGGFLRLSLEAKYHDRAKSAAEPI
PYLYPLVNGQPDPREAGADHVIAGGYGRSNRDKIINTGYNAELPLGENTTLYSFSTVSYR
DIKDARGASVAAPTGYGGQANSQGASVLPQIYPGGFQAYRRIQEWDYQAAVGIRSQLAGW
DVDLSTSYGQDNVKLGAENTLNPSIGPNSPTDFFMGRQKQDLWVNNLDVSREYEVGFAKP
LNVAFGVEHRWERFQNIAGEPDSYRDGGYVIPVDDTPFGRLYGGRSPSPGLVSFTGTSPA
DETSLSRNNLAAYLDVSTDLTPGWFVGLAGRFEHYSDSAGNTFSAKASTRIELAPGLALR
GGVNTGFRAPSLAQTGFSTTQNTVTVIGDERVLTVSKFLPVNSAAALALGAKPLKPEKSL
NFTAGITYESGPLRLTVDAYQIRIDNRIVKTEFLGTASNGGSAIRAILEGNGVEDVDSAQ
FFTNAIDTRTRGVDVVGEYTLDTASVGTFRLSAAYSYNKTKILSVIDNPAELSSLNVTLF
GRQARRDLVAATPRSKVVLTSNWSSGPVKVLARATRYGGYTESSNLAASDRTFGGKWIAD
AEIGYQLTSALDLAVGANNLFDTYPDRNGAIAFDGSGQYGGFAPFGLNGGFYYARVGVKF
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatcctcaagtcgtttgccttagccgccagtgtttccctgatccccatcaccgcg
gcccatgccgaggcggccgccgatgccgcagccgatgccgcagcggaggtggaaggcagc
gccatcatcgtcaccggcgcgcgcgggcagacgcagcgatcggtagcggacagcccggtg
ccggtggacgtgatcggcccggcagagctgaaatccaccggccgcaccgggctcaaggag
atcctgggcaacatcatcccctcgctcaccatgcccgcactgggcggcggcggcacgtcg
gcaagcgtgcggccgatctcgatccgggggctttcgggcgactatgtgctggtgctggtc
aacggcaagcggcggcatacgacatcgctcatcaacaacctgtcgcgcatctccggcggt
tccaccccggtcgacatcgacctgatcccgaccagcggcgtcggccacatcgaagtcctg
cgcgacggcgccgccgcgcaatatggctcggacgcgatttcgggcgtcatcaacatcatc
ctcgacaacaccgcgcacggcggcgacctgtcgcttaccggcggacagcaatatgcgggc
gggggcgagctggtgcagctttccggctcctacggcgccccgctgggcgacggcggtttc
ctgcgtctgtcgcttgaagccaagtaccacgaccgtgccaagtcggcggccgagccgatc
ccctacctctatccgctggtgaacggccagcccgacccgcgcgaagccggcgccgaccat
gtgatcgccgggggctatggccgctccaaccgcgacaagatcatcaacaccggctacaat
gcagagctgccgctgggcgagaataccacgctctattcgttctctacggtaagctaccgc
gatatcaaggatgcgcgcggcgcgtcggtcgccgctcccaccggctatggcgggcaagcc
aattcccagggtgcctcggtgctgccgcagatataccccggcggtttccaggcctatcgc
cgcattcaggagtgggactatcaagccgccgtgggcatccgctcgcagctggcgggatgg
gatgtcgacctgtcgaccagctacgggcaggacaacgtcaagctgggcgcggaaaacacg
ctcaacccctcgatcgggccaaacagcccaaccgacttcttcatgggccggcaaaagcag
gacctgtgggtcaacaacctggatgtcagccgcgaatacgaggtcggtttcgccaagccg
ctgaacgtggccttcggcgtggaacaccgctgggagcgtttccagaacatcgccggagaa
ccggacagctaccgcgacggcggctacgtgatcccggtggacgacacgccgttcggccgg
ctctacggcgggcgctcgccttcgccgggccttgtctcgttcaccggcacttccccggcg
gacgaaaccagcctgagccgcaacaacctggccgcttatctcgatgtgtcgaccgacctg
acgcccggctggttcgtgggactcgcgggccggttcgagcactattccgacagcgccgga
aacaccttcagcgccaaggcatcgacccgcatcgaactggcgccgggccttgccctgcgc
ggcggcgtgaacacgggtttccgcgcgccgtcgctggcgcagaccgggttctccaccacg
cagaacaccgtcaccgtgatcggcgacgagcgggtgctgaccgtctcgaagttcctgccg
gtcaacagcgccgccgctctggcgctgggcgcgaagccgctcaagccggagaagtcgctc
aacttcaccgcgggcatcacgtatgaaagcggcccgctgcggctgaccgtcgacgcctac
cagatccgcatcgacaaccgcatcgtgaagaccgaattcctcggcaccgcgtcgaacggc
ggctccgcgatcagggcgatcctggagggcaacggggtggaggacgtggacagcgcccag
ttcttcaccaacgccatcgacacccgcacgcgcggggtggacgtggtgggcgaatatacg
ctggacaccgcctccgtcggcactttccgtctcagcgcggcatatagctacaacaagacg
aagatactcagcgtcatcgacaatcccgctgaactgagcagcctgaacgtcacgctgttc
ggccgtcaggcgcggcgcgatcttgtcgccgcaacgccgcgcagcaaagtggtgctgacc
agcaactggtcgtccggcccggtgaaggtgctggcccgcgccacccgctatgggggctat
accgagtccagcaacctggctgcatccgaccgtacctttggcggcaagtggatcgcggac
gccgagatcggctaccagctgacatcggcgctggacctcgccgtgggcgccaacaacctg
ttcgacacgtacccggacaggaacggcgccatcgctttcgacggctccggccaatacggc
gggttcgcgccgttcgggctcaacggcgggttctattatgcgcgggtgggggtgaagttc
taa
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