Novosphingobium sp. P6W: TQ38_016205
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Entry
TQ38_016205 CDS
T05550
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
nov
Novosphingobium sp. P6W
Pathway
nov00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
TQ38_016205
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nov01007
]
TQ38_016205
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nov03016
]
TQ38_016205
Enzymes [BR:
nov01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
TQ38_016205
Amino acid related enzymes [BR:
nov01007
]
Aminoacyl-tRNA synthetase
Class II (U)
TQ38_016205
Transfer RNA biogenesis [BR:
nov03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
TQ38_016205
Prokaryotic type
TQ38_016205
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
tRNA_bind
B5
FDX-ACB
Motif
Other DBs
NCBI-ProteinID:
AXB77856
UniProt:
A0A2Z5EE57
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All DBs
Position
1:3367223..3369637
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AA seq
804 aa
AA seq
DB search
MKFSLSWLKQYLETDATIEQIAATLNAIGLEVEGIEDPAEKLEGFRVAKVLTAARHPDAD
KLQVLSVDTGDGSPLQVVCGAPNARAGMIGVLGLPGATVPANGMVLKKSAIRGVESNGMM
CSTRELELGEDHDGIIELPEDAPIGTPFAQYHGADPVIDVAITPNRPDCMGLYGIARDLA
AAGIGTLNPLPVEDLPGTFPCPVAVRTEDAEGCPAFYGRVIKGVKNGPSPQWLQDALKSA
GQRPISALVDATNFVMLAFGRPAHAYDLAKLSGAVVARRASEGETVVALNEKTYTLDAEM
TVIADDAGAHDIAGIMGGQHSGCGDDTTDILLEIAYFDPTRIAKTGRKLNLTSDARGRFE
RGIDPQFLDTGMALLTGLIVKLCGGEVSEVVRAGAAPGTPKIVHFEPSLVEKLGGVTVNP
GEQKRILESLGFSVVEADGWAVTVPGWRPDVDGAPDIVEEVVRIHGLDKVESVPLPRAEG
VALPTATPAQTLERRVRRAAAARGLQEAVTWSFLPEAPAQAFLGQAQDERDGELWVLANP
ISEDMKAMRPSLLPGLLMAARRNLDRGASALRLFEIGRRYLRGPGGASDERLALGLVLAG
EKTPRGWATGKAAAFDAYDAKAEVVALLAEAGAPVEKLQVMGEAGPQFHPGQSATLRLGP
KNVLARFGMLHPRIAKQFDIDGPVALAEIYLDAIPGRKGAAAFARTSYAPPALQAVTRDY
AFLVPAGLPAADLVRTVQGADKVNIVAARLFDDFRGQGVPEGQKSLALEVTLQPLEKSYK
DEDLKAISDKVTAAAAKLGAVLRG
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgaagttctcgctctcctggctcaagcagtacctggaaaccgatgcgacgatcgagcag
atcgccgccactctcaacgctatcggcctcgaagtcgaaggcatcgaggacccggccgag
aagctggaaggcttccgcgtcgccaaggtgctgacggctgcgcgtcaccccgatgcagac
aagctgcaggtcctctccgtcgacacgggtgacggctcgccgctgcaggtcgtgtgcggc
gcccccaatgcccgcgccggcatgatcggcgtgctgggcctgcccggcgcgactgtcccc
gccaacggcatggtgctcaagaagtcggcgattcgcggtgtcgaatcgaacggtatgatg
tgctccacccgcgagttggaactgggcgaggaccacgacggcatcatcgaactgcccgag
gacgcccccatcggcacgcccttcgcgcagtatcacggcgccgatccggtcatcgacgtg
gcgatcacccccaaccggccggactgcatgggcctttacggcatcgcccgcgatcttgcg
gcggccggtatcggcacgcttaaccccctcccggtcgaagaccttcccggcaccttcccc
tgcccggtcgccgtccgcaccgaggatgccgagggttgcccggcattctacggccgcgtc
attaagggcgtgaagaacggcccctcgccgcagtggctgcaggatgcgctgaagtccgcc
ggtcaacgcccgatttcggcgctggtcgatgcgaccaacttcgtcatgctcgccttcggg
cgtccggcccacgcctatgaccttgcgaagctgagcggcgccgtcgtcgcgcggcgcgcg
agcgagggcgagacggtcgtcgcgctgaacgagaagacctacaccctcgacgccgagatg
acggtgatcgccgacgatgcgggcgcccacgatatcgcgggcatcatgggcggccagcat
tccggctgcggcgatgacaccaccgacatcctgctggaaatcgcctacttcgatccgacc
cgtatcgcgaagacgggccgcaagctcaacctcacctccgacgcgcgcggccgattcgag
cgcgggatcgacccgcagttcctcgacaccgggatggcgctgctgaccgggctgatcgtg
aagctgtgcggcggcgaagtgtccgaagtcgtgcgcgcgggcgctgcgccgggcacgccc
aagatcgtccacttcgaaccctcgctggtcgagaagctgggcggcgtcaccgtcaatccc
ggcgagcagaagcgcatcctcgaaagcctcggcttctcggtggtcgaggctgacggctgg
gctgtcaccgtccccggctggcgccccgacgtcgacggcgcgcccgacatcgtcgaggaa
gtcgtgcgtatccacggcctcgacaaggtcgaaagcgtgcccctgccgcgcgcggaaggt
gtagccctgcccacggccacgcctgcgcagacccttgagcgccgcgtgcgccgcgccgct
gccgcgcgcgggctgcaggaagccgtcacctggtcgttcctgcccgaagctcccgcgcag
gccttccttggacaggctcaggatgagcgggacggtgagctatgggttcttgccaacccg
atcagcgaggacatgaaggccatgcgcccttcgctgctgcccggcctgctgatggcggcc
cggcgcaacctggatcgcggtgcttctgcgctgcgcctgttcgagatcggccgccgctat
ctgcgcggccccggcggcgcgagcgacgaacgcctcgctctcggcctcgtgctggcgggt
gaaaagactccgcgcggctgggccaccggcaaggccgctgcttttgacgcctatgacgcc
aaggccgaagtcgtcgccctgctcgccgaagccggcgcgccggtcgaaaagcttcaggtc
atgggagaggccgggccgcagttccaccccggccagtccgccaccctgcgcctcggcccc
aagaacgtgctggcacgcttcggcatgttgcaccccaggatagccaagcagttcgacatc
gacggccccgtggccctggccgagatctatctcgacgccattccgggccgaaagggcgcg
gcggctttcgcccgcacctcctatgcgcccccggctcttcaggcggtgacgcgcgattac
gctttcctggtccccgccggcctgcccgccgcagacctcgtgcgcacggtgcagggcgcg
gacaaggtgaacatcgtcgcggcccgcctgttcgacgacttccgcggacaaggtgttcct
gaaggccaaaagtcgctcgccctcgaagtcacgctccagccgctcgaaaagagctacaag
gacgaagacctcaaggcgatcagcgacaaggtgaccgccgccgccgccaagctgggcgcg
gtgctgcgaggctga
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