Novosphingobium sp. P6W: TQ38_017325
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Entry
TQ38_017325 CDS
T05550
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
nov
Novosphingobium sp. P6W
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nov02000
]
TQ38_017325
Transporters [BR:
nov02000
]
Other transporters
Pores ion channels [TC:
1
]
TQ38_017325
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Cadherin_5
Motif
Other DBs
NCBI-ProteinID:
AXB78415
LinkDB
All DBs
Position
2:complement(189184..191490)
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AA seq
768 aa
AA seq
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MISENSNGMVKRAAFAFSASVFALAAASPAFAQVEEIIVTAQKVKQNIQDVPIAISAVTG
DAMARAGAKSLEDITSIVPSVTFRKGTTNANSAIVMRGVGTISFSVAAEPSVSTVVDGIV
LSRSGQSFLDLVDFDRLEVLRGPQGTLFGKNASAGLVNIVSKGGTKDFEAEANVSGTTDD
EYRAKMTLSGPIAQDLTARVTGFYGTFDGNLKNIAVDKTVNGYEHYGARGLIDYDGNGGR
LRLIADYFKANDDCCAEVTGVSRGAVLDRELGITPQGEDTRKVNQNLVTRSLDRQYSFTA
SADIDTFADHTLSIVTGYRNWKNTEIRDGDFLPRALVGTPQLHDRGTVETDQVSAEVRLA
SPQNQALTYQVGGFLWYSKNTQDFTRSDVTCATSTSPIDPVTGARPCNLSDTVNTLFPTA
SSRSDVSFRNWAIFGQSTYEFTPQLRLTLGGRFTHDSVSYVHTRAPAVNATTGLPATGAG
LSGVGAGGTIASGGNGTNTSRGSTSADNFSGKAVLQYNVADDVMLYGSYTRGYKGPAFNV
FFNHTAPTNSQPIDPEKSNSFEAGVKSQFFGRMLQVNATAFLVDYKGFQANNFVLLNGAV
VTNLTNAGTVRSKGFEVDATFAPTSGLTFRANAAYADAKVRRFNPNPLTNAPDARDGTRL
PLAPKFSYTLGADYDVDAGPVKLYLSSDWHHVSKQFSDLGESGEIDPYGIWNASVGVSDS
EDKYRLTFMVRNLLDDSYVLLNTTAGQRLMIPRDADRYAGLNLRARFN
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgatttcggaaaattccaacggtatggtcaagcgcgcggcattcgcattttctgcgtcc
gtgttcgcactggcagcggcttcgcctgcttttgcccaggtcgaagaaattatcgttact
gcgcagaaggttaagcagaacatccaggatgttccgatcgccatcagcgcggttaccggc
gatgccatggcccgcgccggcgccaaaagccttgaggacatcacctcgattgttccctcg
gtgaccttccgcaagggcacgaccaacgccaacagcgccatcgtgatgcgcggcgtcggc
accatcagtttctcggtcgcggcagagcccagtgtgtccaccgttgtcgacggcatcgtg
ctgagccgctcgggccagtcgtttctcgacctcgtcgatttcgatcgtctcgaagtgctt
cgcggcccgcagggcacgctgttcggcaagaacgcgtcggctggcctcgtcaacatcgtt
tccaagggcggcaccaaggattttgaagccgaagccaacgtttcgggcaccaccgacgac
gaataccgcgccaagatgaccctgtccggcccgatcgcgcaggacctgacggcgcgcgtc
accgggttctacggcacgttcgacggcaacctgaagaacatcgcggtcgacaagaccgtt
aatggttacgagcactacggcgcacgcggcctgatcgattatgacggcaacggcggccgc
ctgcgcctgatcgcggactacttcaaagccaacgacgattgctgcgccgaagtcaccggc
gtatcgcgcggcgccgtgctggaccgtgaactgggtatcacgccgcagggcgaagacacc
cgcaaggtcaaccaaaacctcgtcacccgctcgctcgaccgccagtacagcttcaccgcc
agcgccgacatcgacactttcgcggatcacacgctcagcatcgtcaccggctatcgcaac
tggaagaacaccgaaatccgcgacggcgacttcctgccccgcgcgcttgttggtactccg
cagttgcatgaccgcggtacggttgaaaccgatcaggtttcagccgaagtccgcctggct
tcaccgcagaatcaagcgcttacctatcaggtcggcggcttcctgtggtattcgaagaac
acgcaggacttcacccgcagcgacgtgacctgcgccacgtcgacctcgcccatcgatcct
gtcacgggcgctcggccgtgcaacctgtcggacacggtcaataccctgttcccaaccgcc
tcttcgcgcagcgacgtgtcgttccgcaactgggcgatcttcgggcagagcacgtatgag
ttcaccccgcagctgcgcctgacgctgggcggccgcttcacgcatgacagcgtgagctac
gtccacacccgcgcgcctgccgtgaatgcgaccacgggccttcccgcaaccggcgccgga
ctttcgggcgtgggcgccggcggcaccatcgcttcgggcggcaacggcaccaacacctcg
cgcggcagcaccagcgccgacaacttctcgggcaaggctgtgctgcagtacaacgtcgcc
gacgacgtgatgctctacggcagctacacgcgcggctacaagggaccggcgttcaacgtc
ttcttcaaccacaccgcgccgaccaactcgcagccgatcgatcctgaaaagtcgaacagc
ttcgaagccggcgtgaagagccagttcttcggccgcatgctgcaggtcaacgccactgca
ttcctggtcgattacaagggcttccaggcgaacaacttcgtcctgctcaacggcgcggtt
gtcaccaacctgaccaatgcaggcaccgtgcgttcgaagggcttcgaggtcgatgcgacc
ttcgcgcctacttcgggcctgaccttccgcgccaacgccgcctatgccgatgccaaggtt
cgccggttcaacccgaacccgctcaccaatgcgccggacgcccgcgacggcacccgcctg
ccgctggctcccaagttcagctacacccttggcgccgactatgatgtcgatgccggcccg
gtgaagctctacctgtcgagcgactggcaccatgtctctaagcagttctccgaccttggc
gagagcggcgaaatcgatccttacggcatctggaacgccagcgtcggcgtgtcggattcg
gaagacaagtaccgcctgaccttcatggtcaggaacctgctggatgacagctacgtgctg
ctcaacacgactgccggccagcgcctgatgatcccgcgcgatgccgaccgttacgcaggc
ctcaacttgcgggcgcgcttcaactga
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