Novosphingobium sp. P6W: TQ38_017675
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Entry
TQ38_017675 CDS
T05550
Name
(GenBank) murein L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
nov
Novosphingobium sp. P6W
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nov01002
]
TQ38_017675
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nov01011
]
TQ38_017675
Peptidases and inhibitors [BR:
nov01002
]
Cysteine peptidases
Family C82
TQ38_017675
Peptidoglycan biosynthesis and degradation proteins [BR:
nov01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
TQ38_017675
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Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
CRISPR_assoc
Motif
Other DBs
NCBI-ProteinID:
AXB78479
UniProt:
A0A2Z5EFR0
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All DBs
Position
2:273187..274632
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AA seq
481 aa
AA seq
DB search
MRKRVIAGSLLALTFTLAGCNFLSGEPDKAAVATSIDQVHWDDASVRQLRKAIDGRAAHG
LDRMKFVVEGQPGSAEGEKALTRSALRYAAALARGASDPDKLYDIYTVPRPKPDLLRRLA
GALSTGKVGDWIDGLAPKDDGYRSLSKAYIALRKQGDAPTPAIPDKGEPLKPGTADPRIP
AIARQLVASDYLDRAAAQGSSYSPAMVQAVQHMQADYGIKPDGVIGSDALEILNLSDADR
ARTIAVAMERMRWLDRNAPPTRIDVNIAAGRLLYWRDGKVADSRKVVVGEPENETPQLGS
PIYRLVANPTWTVPRSIQNKEIAGKGSAYLRRNNMAWKDGWVVQQPGPKNSLGLVKFDMK
NEHQIYLHDTPAKQLFQEVQRQRSHGCVRVEDALGFAEMLARDEGVLDEWHRARATGKET
FVPLPREIPVRLIYQTVGFGEDGEPVIRSDPYGWNDGVAAALGFAAGQAYRLKTSGNDVG
P
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcaaaagagtgattgctggttcgctgttggctctaacgttcacactagccggatgc
aatttcctttccggagaacctgacaaggcagcagtcgcgaccagcatcgaccaggtgcac
tgggacgacgcatcggtacgccagcttcgcaaggctatcgacggacgcgctgcacacggc
ctcgatcgcatgaaatttgtcgtagaaggccagcccggcagcgccgagggcgaaaaggcg
ctgacccgcagcgcgcttcgctatgcggcagccttggcacgcggtgcctcagatcctgac
aagctatacgacatctacacggtgccgcgtcccaagccagacctgctgcggaggcttgcc
ggtgcgctttcgaccggtaaggtcggcgactggatcgatggccttgcgcccaaggacgat
ggttatcgcagcctctcaaaagcctatatcgcgctgcgcaagcagggtgatgcgccaacc
cccgccattccggacaagggtgagccgctgaaacccggcactgccgacccgcgtattccc
gcgatagcccgccagttggtggcgtccgactatcttgaccgggccgcagcgcagggtagt
agctacagcccggcaatggtccaggccgtgcagcacatgcaggccgattacgggatcaag
cccgacggcgtcatcggcagcgacgcgctcgaaatcctcaacttgtccgatgcggaccgt
gcaaggacgatcgcggttgccatggagcgaatgcgctggctggatcgtaatgctccgcct
acccgcatcgatgtaaatatagccgccggaaggctgctctactggcgcgacggaaaggtt
gccgacagccgcaaggtcgtggtcggcgaaccggagaacgaaacgccgcagctgggatcg
ccgatctaccggctcgtggccaatccgacatggaccgtgccccgctcgatccagaacaag
gaaatcgccggcaagggcagcgcctatctgcgccgcaacaacatggcctggaaggacggc
tgggttgtccagcagccgggcccgaaaaactcgctcggcctggtcaagttcgacatgaag
aacgagcaccagatctaccttcacgacacccccgccaagcagctgttccaggaagtccag
cgccagcgcagccacggctgcgtccgggtcgaggatgcgctgggctttgcggaaatgctg
gcgcgcgacgaaggtgtgctcgacgaatggcaccgcgcccgcgcgaccggcaaggaaacc
ttcgtgccattgccgcgagagatccccgtcaggctcatctaccagacggtagggttcggc
gaagacggagagccggtcatccgctccgatccttacggctggaacgacggtgtcgcggcc
gcgctgggcttcgctgcgggccaggcctaccgtctgaagacctcgggcaacgatgtcggc
ccgtaa
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