Novosphingobium sp. P6W: TQ38_017855
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Entry
TQ38_017855 CDS
T05550
Name
(GenBank) hypothetical protein
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
nov
Novosphingobium sp. P6W
Pathway
nov01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
nov00536
]
TQ38_017855
Enzymes [BR:
nov01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
TQ38_017855
Glycosaminoglycan binding proteins [BR:
nov00536
]
Heparan sulfate / Heparin
Enzymes
TQ38_017855
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-ProteinID:
AXB78507
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All DBs
Position
2:320033..321586
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AA seq
517 aa
AA seq
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MSSPLSRPTALASIFALAVSPCVPVNARDFIAAPAKMPRIGEIDARYQAYNLDLIAITGM
PPPAAKPDAKEGSDARVDTVMSGVKLERPLDLYNRRIRTLARALGPAYLRTSGTSANSVF
FQDDDKPVLASPPTGYNTVLSRAQWKGVIDFARAVDAKLLMSFTVNSAVRDAKGTWTPLQ
AAPLAAYTRRIKGEIDAAELFNEPNLPNYGGAPKGYDGAWFARDQVAFRAFAARTLPKMK
IVGPGDVVVANLPLPGNLTAADLLAGDPKPRFDVVSYHFYPAVAPRCAPPNTPVSTTPEL
SMTDPWFARTEKSLLDHKALRDRYAPGAPIWNTETAGAACSGAPWSATFVDTFRYVDQLG
RLAKLGASMVFHQTLVGGNYGLLEPETFAPRPNYWAALLWKRLVGTTVLGTGSFETPGLH
IYAHCSPQRKGGVTLVAVNAGRKEEALQAGADAQVYTLTAPELQGKSVALNGRTLELGQG
DRIPDLRPQLVAGGAVKLPATSISFVQVPGAQNPACR
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgcccctgtccaggccaaccgcgctcgcgagcattttcgctctcgcggtcagc
ccctgcgtgcccgtgaatgctcgggactttatcgccgcgccggcgaagatgccgcggatc
ggcgagatcgatgcccgctaccaggcatacaatctcgatcttatcgcgatcacgggaatg
ccaccccccgccgccaagcccgacgcgaaagaaggcagcgacgcccgcgtcgatacggtg
atgagcggcgtgaagctagaacggccgctggacctctataatcggcgcattcgtaccctg
gcccgcgcgctgggccctgcttatctgcgcaccagcggaacctcggccaactcggtcttc
ttccaggatgacgataaacccgtactagcctctccgccgaccggctataacaccgtgcta
agccgcgcgcagtggaagggcgtgatcgacttcgcccgcgcagtcgatgcaaagctgctg
atgtccttcacggtcaattccgccgttcgcgacgcgaagggaacgtggacgccgctgcag
gccgcgcctctggcggcgtatacccgccgcatcaagggcgagatcgatgctgcggaactg
ttcaacgagcccaaccttcccaactacggcggcgcgcccaaggggtacgacggggcctgg
ttcgcccgcgatcaggttgccttccgcgcctttgcggcccgcacgctgccgaagatgaag
atcgtggggccgggcgacgtcgttgtcgccaaccttccgctgccaggcaatcttactgca
gcggatctgctggcgggcgatccgaagccccggttcgatgtagtttcctatcacttctac
ccggccgtcgcaccgcggtgcgcgccgccgaatacccccgtcagcaccacccctgaacta
tcgatgaccgacccgtggtttgcgcgcacggaaaaatcgcttctcgatcacaaggcactg
cgggatcgttatgcacctggcgcgccgatctggaacaccgagactgcgggagcggcctgc
agcggcgcgccctggagcgcgactttcgtcgatacgttccgctatgtcgaccagctcggc
cgccttgcgaagctgggcgccagcatggttttccatcagacgctcgtcggcggcaactac
ggtttgctcgaacctgaaacctttgccccgcgccccaactactgggcagcgctgctgtgg
aagcgtctggtcgggactaccgtacttggcaccggcagtttcgaaacgcccgggcttcac
atctacgcccattgttcgccgcagcgcaaaggcggcgtcacgctcgttgcagtcaacgca
ggccgcaaagaagaggcgttgcaggccggagccgacgcgcaggtctacacgctgacagca
cctgagcttcagggcaaatcggttgctctcaacggacgtactctcgaattgggtcagggc
gacaggatacccgatctgcgtccgcaactcgtggcgggcggcgccgtcaagctgccggct
accagcatcagcttcgtgcaagttccgggcgcacaaaacccggcctgtcggtga
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