Novosphingobium sp. P6W: TQ38_017990
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Entry
TQ38_017990 CDS
T05550
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
nov
Novosphingobium sp. P6W
Pathway
nov02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TQ38_017990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nov02000
]
TQ38_017990
Transporters [BR:
nov02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
TQ38_017990
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF5375
Motif
Other DBs
NCBI-ProteinID:
AXB79859
UniProt:
A0A2Z5EJD0
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All DBs
Position
2:354482..356047
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AA seq
521 aa
AA seq
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MSEDQSRRSFLTKGALLSGGLALGTGLLSACGKDKPGAAAANGPPRAGGKARIAIIAGAQ
TGNLDAHKPLGTGSFRGWALYAKLWEWDREAHPGLALAEFTEVNDDATKWTIRLRKGLEF
HHGKSIRAEDVIYSLRRLTDPALASPYGSYLPSLQRDGIKALDPLTVTIPFEQGHGLAAL
PELWMSWGGIVPTDYDPVTNPVGAGPYRLKNFTPGQRSTFSKFENYYKPGQPYLDEVEII
DFKDPISRLQAMQTGQVDVAPTIAFEQLAFFKSSDQFEVVSSQTDAWHGFAMNLSKAPFN
DPRVAKAFRLIADRPELVKRVLHGQGRVANDLYAPSDPTFDRTIPQRTRDLAEARSLLRS
AGHGGGLTVELVTTAGAGGNAGIVFAQQAREAGVEVKIKLVDDSIFAGPDKNNWTFSTIV
GVSRPFLLTLQQHDGPRSAGNKTHFQDAEFTRLVTEAAAQPDVEKRKGLVGAAQRIQHDR
GGLLIWGFSNNQEAVSRNIGGVTPDRTAFSAWRTDALWRRA
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgaagaccagtcgcgccgatcatttctgacgaagggggcgctgctttccggtggc
cttgcccttggcaccggcctgctttcggcatgtggcaaggacaagcccggcgcggcggct
gcgaatggcccgccgcgcgcaggcggcaaggcgcgcatcgccatcatcgccggcgcgcag
accggcaatctcgatgcccacaagccgctgggcaccggctcgttccgtggctgggcgctt
tacgccaagctgtgggaatgggatcgcgaggcccatcccggccttgccctcgccgaattc
accgaagtgaacgacgacgccacgaaatggacgatccggctcaggaaagggctggaattc
caccacggcaagtcgatccgggcagaggatgtcatctactcgctgcgccgcctgaccgat
cccgcactggcatcgccctatggctcgtacctgccctcgctccagcgcgacgggatcaag
gcgctcgatccgctcaccgtcacgatccccttcgagcagggtcacggccttgccgccctg
ccggaattgtggatgagctggggcggcatcgtgccgaccgattacgatcccgtcaccaat
ccggtgggcgccgggccctatcgcctcaagaacttcacgcccggccagcgctcgactttt
tcgaagttcgagaactactacaagcccggccagccctacctagacgaagtcgagatcatc
gacttcaaggacccgatctcgcgcctgcaggcgatgcagaccggccaggtcgatgttgcg
cccaccatcgcgttcgaacagctcgccttcttcaagtcttcggaccagttcgaggtcgtc
tcgtcccagaccgacgcctggcacggcttcgcgatgaacctgtccaaggcgccgttcaac
gacccgcgcgtggcaaaggcgttccgcctcatcgccgaccgccccgaactggtgaagcgc
gtgctgcacggccagggccgcgtcgccaacgacctctacgcgcccagcgatccgacgttc
gaccgcaccattccccagcgcacccgcgatctggccgaggcccgcagcctgctgcgctcg
gcaggccacggcggcggactgacggtggagctggtgacgacggcgggcgctggcggcaac
gccggcatcgtcttcgcccagcaggcacgcgaggccggcgtcgaggtgaagatcaagctg
gtcgacgattccatcttcgcggggcctgacaagaacaactggaccttcagcaccatcgtc
ggcgtatcgcgcccgttcctgcttaccctgcaacagcatgacgggccgcgctcggcgggc
aacaagacccatttccaggacgccgagttcacccgcctcgtcaccgaggccgccgcgcag
cccgacgtggaaaagcgcaagggcctggtcggcgcggcgcagcgcatccagcacgaccgg
ggcggcctgctgatctggggcttctccaacaaccaggaagcggtgtcgcgcaatatcggc
ggcgtcacgccggaccgcaccgccttttccgcctggcgcaccgacgcgctgtggcgccgc
gcctga
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