Novosphingobium sp. P6W: TQ38_018160
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Entry
TQ38_018160 CDS
T05550
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
nov
Novosphingobium sp. P6W
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nov03032
]
TQ38_018160
03036 Chromosome and associated proteins [BR:
nov03036
]
TQ38_018160
03400 DNA repair and recombination proteins [BR:
nov03400
]
TQ38_018160
DNA replication proteins [BR:
nov03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
TQ38_018160
Chromosome and associated proteins [BR:
nov03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
TQ38_018160
DNA repair and recombination proteins [BR:
nov03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
TQ38_018160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
HU-CCDC81_euk_1
NA37
Motif
Other DBs
NCBI-ProteinID:
AXB78556
UniProt:
A0A2Z5EG96
LinkDB
All DBs
Position
2:complement(396521..396796)
Genome browser
AA seq
91 aa
AA seq
DB search
MNNNDLADAIASAHDLTKADARKVVDGVFDAIAEAASKGEEISLNGFGKFKVKDSPEREG
RNPATGEAMTIKASKKLAFTPAKAMKDKLNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaataacaatgacctcgccgacgccatcgcctcggctcacgacctgaccaaggctgat
gcgcgcaaggttgtagacggcgtgttcgacgccatcgccgaggcggccagcaagggcgag
gaaatctcgctcaatggctttggcaagttcaaggtcaaggacagcccggagcgcgaaggc
cgcaatcccgcgactggcgaggccatgaccatcaaggcgtcgaagaagctcgcttttacg
ccggccaaggcgatgaaggacaagctgaacggctga
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