Novosphingobium sp. P6W: TQ38_019545
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Entry
TQ38_019545 CDS
T05550
Name
(GenBank) RNA polymerase sigma factor
Organism
nov
Novosphingobium sp. P6W
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
GerE
Sigma70_ECF
HTH_23
HTH_28
HTH_10
HTH_24
PhyR_sigma-like
Sigma70_r2
UPF0122
HTH_11
HTH_5
HTH_AsnC-type
HTH_40
KORA
DUF6362
HTH_1
Phage_terminase
HTH_38
CsiV
DUF2774
HTH_50
HTH_VMAP-M9
PCI
DUF7236
Motif
Other DBs
NCBI-ProteinID:
AXB79888
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Position
2:complement(705665..706165)
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AA seq
166 aa
AA seq
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MEFSKASKYAPGSAFSWARLRNQVARMTRRDDAEDLLHDAWVNVATGRAVVQNADALLAR
AATNRGIDAYRRERRAGETLVWDPDVSTVADEHPLQDEVLIARERLGRLRVGVEALSPRT
RQIFLMYRLDGRKYREIAEELGISQSAVEKHIARAMAYLADWMENW
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atggagttctcgaaagcatcgaagtacgctccggggtcagcgttcagctgggcgcgattg
cgaaatcaggttgcacgcatgacgcggcgtgacgacgccgaggatctgcttcacgatgcc
tgggttaacgtcgccaccggccgggccgtggtgcagaatgccgatgcgctgcttgcccgt
gccgcgaccaaccgcggcatagatgcctaccgccgtgagcgacgggcgggggaaactctt
gtctgggatccggacgtgtctaccgttgcagacgaacatccattacaggacgaagtcctg
atcgctcgtgaacggctcgggcgtctgcgcgtgggagtggaagcactgagcccgcgcacc
cgacagattttcttgatgtatcgtctggacggtcggaaatatcgtgaaattgccgaggaa
ctcggtatcagccaaagcgccgtcgaaaagcatattgccagggcaatggcgtatctggcc
gactggatggagaattggtga
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