Novosphingobium sp. P6W: TQ38_020795
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Entry
TQ38_020795 CDS
T05550
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
nov
Novosphingobium sp. P6W
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nov02000
]
TQ38_020795
Transporters [BR:
nov02000
]
Other transporters
Pores ion channels [TC:
1
]
TQ38_020795
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AXB79001
LinkDB
All DBs
Position
2:complement(1020885..1023314)
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AA seq
809 aa
AA seq
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MIINCRVLRLTTALSTALLGWTAPALAQTAPNERAKLAEPLEGDIVVTARKREESLLKTP
LTVTAMTSEMLEAKGIVSMQSLASSTPGININNSSSGHADRSFQQISLRGFTPVSTTATT
TSLFVDGVPVSSPSPFTSISDPERIEILKGPQSAYFGRNTFAGAINFVNKVPTDEWHGQV
TGMVGTRGNWRLRGSIEGPILGDALTFRVTADGFDKNGSWRNNYDGSTLGDESTRNASAL
IVAKPTDRLTIKAFAMWTKDEDGASAQTRIVAKDITTPGGTVVYKNQSNCATAAGRPFIC
GTTPGLINPVGANTAFTSKLQDWLANPAGRLISADDTVEHYGLLRYTTHAHLTADYEVND
NLSVSLLGGRNKEKWTTLVDLDGFNSSAFTGASYYNGAYYDFPYLIERKTSDWSGEGRLN
YEFGAAHGVVGVSYLEATTQTGSGTPIYGGRPGTTGKNGNKTYGVFGGLTYDFTDQFSVS
VEGRYQVDNIAVFAGPNGQRVQGSTYIPAGFYMANSKLVGGKFKNFTPRVIANFQIDPDL
MVYASYSRGVNPSQFNSFMIAATTTASQQTAAAALGIPLTVDPEELTNYEAGVKGKALGG
LLTYTAAVYYAQWKKQITAYSFILDGTLFSGVNNSGATDLYGAEFETHWRISDLVRIDAS
GAYTGTDIKKFVSPSVSAYSGITNFDGKEMARTSKWSANVGAQLGGDIRSLEDAAWFARA
DYSFKSGVWADQANIVKTQDRHLVNLRTGFSKGKASLELFVNNVFNNKGYTSIDDNWAIS
PTESFAVYNAVLVGLPELRTAGVQVKLAF
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgatcataaactgccgtgtcctaagattgaccaccgcactgtcgaccgcgctgctgggc
tggaccgcaccagcgttggcgcaaacggcgccgaatgaacgagcgaagctggccgaaccg
cttgagggtgacatcgtcgtgaccgctcgcaagcgtgaggaaagtctccttaagactccg
ttgacggtcaccgcgatgacctccgaaatgctggaagccaagggcatcgtttcgatgcag
tcactcgccagttccacacctgggatcaacatcaacaattcgtcctccgggcacgccgac
cgctcgttccagcagatctcgctgcgcggcttcacgcccgtctcgactacggcgacgaca
acctcgctattcgtcgacggggtgccagtctcatcgccgtcacccttcacctctatcagc
gatcccgagcggatcgaaatcctgaagggcccgcagagcgcgtactttggccgaaacacg
ttcgcgggcgcgatcaacttcgtgaacaaggttccgaccgacgaatggcatgggcaggtc
accggcatggtcggtacgcgtggcaactggcgccttcgcggttcgatcgaaggaccgatt
ttgggggatgcgctgaccttccgcgtcaccgccgacggcttcgacaagaacggctcgtgg
cgcaacaactacgacggcagcacactgggagacgaatcgacccgcaatgccagcgcgctg
atcgtagccaagcccactgacaggctcaccatcaaagccttcgcaatgtggacgaaggac
gaggacggggcttcggcccagacgcgcatcgttgccaaggatattaccacgccaggcggc
actgttgtctacaagaaccagtccaactgcgccacggccgccggccgtccgttcatctgc
ggcaccacacccggcttgattaacccggtcggcgcaaataccgccttcaccagcaagctg
caggactggctcgccaaccctgccggccgccttatctcggcggacgacacggtcgagcac
tacggcctgctgcgctacactacccatgcccacctgaccgcggactatgaagtgaacgac
aatctgtcggtttcgctgcttggcgggcgcaacaaggaaaaatggaccacgctcgtcgat
cttgacggtttcaattcttcggcattcaccggcgctagctattacaatggcgcctattac
gacttcccctacctgattgaacgcaaaacgagtgattggtcgggtgaaggccggttgaac
tacgagttcggcgctgcgcacggcgtggtcggggtcagctatctcgaagcgacgacgcag
accggaagcgggacgccgatctatggcggccgcccagggaccactgggaagaacggcaac
aagacctatggcgtcttcggcggcttgacttacgacttcaccgaccagttctcggtaagc
gtcgagggacggtaccaggtcgataacatcgcagtctttgccggcccgaacggccagagg
gtacaaggctcgacctatatccctgccggtttctatatggccaacagcaagctggtgggg
ggcaagttcaagaacttcacgccccgcgtgatcgccaatttccagatcgacccggacctg
atggtttatgcgtcttattcgaggggcgtgaacccctcgcagttcaacagcttcatgatt
gccgctaccactacggcctcgcagcagacggcggcggcggcgctgggtattccattgacc
gttgatcccgaagaactgacaaactacgaggcgggcgtcaaaggcaaggccctcggcggt
ttgctgacctacacagcggccgtttattatgctcagtggaagaagcagatcaccgcctac
agcttcatcctcgacggcacgctgttcagcggcgtgaacaattccggcgcaaccgacctt
tacggtgctgagttcgagacacactggaggatttctgacctcgtccgcatagatgcttct
ggcgcctataccgggactgacatcaagaagttcgtcagtccgtccgtcagcgcctattca
ggcatcacgaatttcgacggcaaggagatggcgcgtacctcgaagtggtcggccaacgtc
ggggcccaactgggcggcgacattcgtagcctcgaagatgccgcctggttcgcgcgggcc
gactatagctttaagtcgggtgtctgggcagaccaggcgaacatagtgaagacgcaggat
cgccacctggtgaacctgcggacgggcttctcgaagggcaaggcctcgcttgagctgttc
gtgaacaacgtcttcaacaacaagggctataccagcatcgacgacaactgggccatctct
ccgaccgagagctttgccgtttataatgccgtgctggtcggcctgcccgaactacggacg
gcaggcgtgcaggtaaagctggccttctaa
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