Novosphingobium sp. P6W: TQ38_021150
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Entry
TQ38_021150 CDS
T05550
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
nov
Novosphingobium sp. P6W
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nov02000
]
TQ38_021150
Transporters [BR:
nov02000
]
Other transporters
Pores ion channels [TC:
1
]
TQ38_021150
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AXB79914
LinkDB
All DBs
Position
2:complement(1116072..1118996)
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AA seq
974 aa
AA seq
DB search
MRGHHGKLYGAVALAALIAGTAQAQEAPAAGGAESPANDIVVTGTRIKRPDLASNSPQTI
VGAEEFRYQGATTVEQVLNRLPQFTADANENVSNGSDGTSKINLRNLGSNRVLVLVDGQR
LMPSQAVNLNLLPSSLVERVDVMSGGASAVYGSDALSGVVNFVLKKDLDGLRIDMQTGFS
QHENNNGAVRSLLTAKGYELAPSSVADGGKQDITVSAGKNFADGRANITVYGGYRKFSPV
RQSSRDVSSCALQDQNEGTELFCGGSSNTPFGSFVPLSDKSTFQGQTLINNRDGSQNFVP
YDNSYAYNYAPDSYFQRSDERITAGGFAHFEISKAAEVYGSFMYMRDHTFSQVAPSAIFL
GEAFPISCNNPYASAGQLQAICGSDAGSDATADALVGYRMSLAPRRDDLKFNDYRYSAGV
RGDLGSGFSYDASYLYSLVRFDETYLNNVDGVKAARALNAISVNGVPTCRSVLDGTDPSC
IPVNVFQAGGVTAEQGAYLFSPSNTSSRNSLKVFSGSLSGDLGQMGVTLPWATRGVGIAL
GAEHRRETLKFSADDIAQQGGATNADGVISVTEGYGEIEIPLIEDKPFFRSLTINAGVRY
SAYDNKQASSGFSSSYNVWTYKGEVSWQPVDDLRIRASYNRAIRAPNVAELFASQSVGNV
AAQDPCAGANPAASLETCQLTGVTAAQYGRIVECPAATCSALGGGNVALKPETADTWTAG
LVITPRALRRFSLSIDYYNIKVKDYIGSIAPSLIIGQCQETGDPYFCGLFRRDARSGALF
GQNAGYIVSTTLNTGFLKTSGIDVNADYSFDVGNLGSINLNMVGTYLIEQVAQPVPGLGS
YDCKGLFGYTCGQPSPEWRHVARLSWMAPSDTTVSLSWRHIGGTRLSSLTDNPLLSAPET
VVNSKIKAYDYFDLSLTQVIDKRLTLRAGVNNMLDKDPPALSAGLLQLFGNGNTYPGVYD
ALGRTIFVGATVNF
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgaggggtcaccacggaaaattgtacggcgcggtagctttggccgcgctcatcgctggg
acggcgcaggcgcaggaagcgcccgccgccggtggggcggaaagccccgccaatgatatc
gtcgtcactgggacgcgcatcaagcgcccggaccttgccagcaacagtccgcagacgatc
gtcggcgcagaagaatttcgctatcagggcgccacgacggtggagcaggtgctcaaccgc
ctgcctcagttcaccgccgacgcaaacgagaacgtatccaacggttcggacggcacctca
aaaatcaacttgcgcaacctcggctcgaatcgcgtgctggtgctagtcgatggacagcgc
ctgatgccttcacaggcggtgaacctgaacctgcttcccagcagcctggtcgagcgcgtc
gacgtcatgtccggcggcgcatcggcggtgtacggttcggacgcactttcaggcgtagtc
aacttcgtcctcaagaaggaccttgatggcctgcgcatcgacatgcagaccggcttctcc
cagcatgagaacaacaacggcgcggtgcgcagcctgcttaccgcaaaaggttacgagctc
gcgccgtcgtcggtggccgacggcggcaagcaggacatcacggtttcagcgggtaagaac
tttgcggatgggcgggccaacatcaccgtctacggcggttaccgcaagttcagcccggtt
cgccagtcgagccgggacgtttcgtcctgcgccctgcaggaccagaacgagggtacagaa
ctgttctgcggcggttcgagcaatacgccgttcggctcattcgtgccgctgtccgataaa
agcacgtttcagggccagaccctgatcaacaaccgggacggctcccagaatttcgtaccc
tacgacaattcctacgcctacaactacgcgcccgacagctacttccagcgctccgacgag
cgcatcacagcaggtggcttcgcgcacttcgagatcagcaaggccgccgaagtctacggc
agcttcatgtacatgcgcgatcacaccttctcgcaggtggcgccctcggcgatcttcttg
ggcgaagcgttcccgatctcgtgcaacaacccttacgccagcgccggtcagcttcaggcg
atctgcggatcggacgcaggcagcgacgctaccgcggacgcgctggtcggctaccgcatg
tcgcttgcgccgcgccgcgacgacctaaaattcaacgactaccgctattccgccggcgtt
cgcggcgatcttggcagcgggttcagctacgacgccagctacctctactcgctggtgcgt
ttcgacgagacctatcttaacaacgtcgacggggtgaaagccgcccgcgcgctcaacgcg
atcagtgtcaacggcgtgccgacctgccgctcggtcctcgatggcaccgacccgagctgc
atcccggtcaacgtcttccaggcaggcggcgttactgccgaacagggcgcgtacctgttt
tcgccaagcaacacctcctcgcgcaactccctcaaagtgttctcgggctcgctcagcggc
gacctgggccagatgggcgtcaccctgccttgggccacacgcggtgtgggcattgcgctg
ggcgcagagcatcgccgcgagacgctcaagttctcagcggacgacatcgcgcagcagggc
ggcgcgaccaacgccgacggcgtcatcagcgtgaccgaaggatacggcgagatcgagatc
ccgctgatcgaggacaagcccttcttccgctctctgacgatcaacgcaggcgtgcgctat
tcggcttacgacaacaagcaggcctcctccggcttcagctccagctataacgtgtggacc
tacaagggcgaggtttcctggcagccggtcgacgaccttcgtatccgcgccagctacaac
cgcgccatccgcgcgcccaacgtggcggagctgttcgcctcgcagtcggttggcaacgtg
gccgcgcaggacccctgcgcgggcgccaaccccgccgcctcgctggaaacctgccagctc
accggcgtgaccgcggcgcagtacggccgcatcgtcgagtgcccggcagccacatgctcg
gcgctaggcggcggcaacgtcgcgctcaaaccagagaccgcggacacctggacggcgggc
ttggtcatcaccccccgggccctgcgccgcttctcgctctcgatcgactattacaacatc
aaggtgaaggactacatcggctcgatcgcgccgtcgctcatcatcggccagtgccaggaa
accggtgatccgtacttctgcggcttgttcaggcgcgatgcccgttcgggcgccctgttc
gggcagaacgcgggctacatagtctcaaccacgctaaacaccggcttcctcaagacgtcg
ggcatcgacgtcaacgccgactactcattcgacgtcggcaacctgggcagcatcaacctc
aacatggtcggcacctacctgatagagcaggtcgcgcagccggttccgggcctgggctca
tatgactgcaagggcctgttcggctatacctgcggccagccctcgcccgaatggcgccat
gtcgcgcgcctgtcgtggatggccccgagcgatacaaccgtctcgctgtcgtggcgccac
atcggcggcaccagactttccagcctgaccgacaacccgctgctgagcgcccctgaaacc
gtggtgaacagcaagatcaaggcctacgactacttcgacctgtcgctgactcaagtcatc
gacaagcgcctaacgctgcgcgccggggtcaacaacatgctcgacaaggacccgccggcc
ctgtccgccgggctgctgcagctgttcggcaacggcaacacctatcccggcgtctacgac
gcgctggggcgcacgatcttcgtgggcgccaccgtcaacttctga
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