Novosphingobium sp. P6W: TQ38_021850
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Entry
TQ38_021850 CDS
T05550
Name
(GenBank) marine proteobacterial sortase target protein
KO
K07114
Ca-activated chloride channel homolog
Organism
nov
Novosphingobium sp. P6W
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nov02000
]
TQ38_021850
Transporters [BR:
nov02000
]
Other transporters
Pores ion channels [TC:
1
]
TQ38_021850
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIT
VWA_3
VWA_2
VWA
VIT_2
VWA_CoxE
vWA-TerF-like
DUF2201
TEX13B-like_middle
Motif
Other DBs
NCBI-ProteinID:
AXB79168
LinkDB
All DBs
Position
2:1263752..1265920
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AA seq
722 aa
AA seq
DB search
MPHSFAFRSCLIPAAVLALGAPAALAVHAGAALAADEAGEDAAPGDQSDEGPAAGTLMLR
GQGIAQALPAVRLGTDMEVNVTGQVARVRVTQAFRNTSDKWMEASYLYPLSQDGAVDSLK
MVVGQRVIVGRIQPREKARAAYEQAKASGRKAGLVEQQRPNMFSTMVANVGPGETVLIAI
EYQAPVAQANGTFSLRLPLVVGPRYTPPHTLNSDAAVADANAVTAAPVLDPKVGAKLSGG
LNPTSIAVRLAPGFDVANLISRYHRVNVSGPLDDRTVRLADTAVPADRDFVLEWRSASAD
PTLGLFAQHTAKGDYLMASVTPPADLSALPTPPREMVFVIDNSGSMGGDSMDEAKASLIH
ALGTLRPQDHFNVIRFDDTMTRLFEHSVAATPDQVALARRFAGSLEAQGGTEMLPALRAA
LTDAGSGGGSDPEVLRQIVFMTDGEISNEREMMAAIGADGGRSHVFMVGIGSAPNDYLME
RMSTIGGGVYTHVGAPGEVAAKMMPLLDVLSHPAVRDLSVRVEGGSLDLTPSRLPDVYAG
RPLVLVGRSDHLAGTLTVSGRIGGKLWERRVDLAAALPSPAVEKLWARRRITDIEADRAL
GKLDDTAADAEVERVGMENGIVTSRTSLVAVDETRSRPDGAPLTREELPINLPAGWDFGH
LFGQAAQRTAVGDGSGDLAAMQAQALELPQTATGFLGVIGKGCALLLAGLAGFAVLMRRR
AA
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgccgcattccttcgctttccgcagttgcctgatccccgccgccgtgctggcgctgggg
gcgcccgccgccctcgcggtgcatgccggcgccgcccttgccgccgatgaggcgggggaa
gacgccgcgcccggcgaccagtcagatgaggggcccgcagccggcaccctgatgctgcgc
ggccagggcattgcccaggccctccccgccgtccgccttggcaccgacatggaggtgaac
gtcaccggacaggtggcccgcgtgcgcgtcacccaggcgtttcgcaacacttccgacaag
tggatggaggccagctatctttatccgctgtcgcaggacggcgcggtggattcgttgaag
atggtggtgggccagcgcgtgatcgtgggccgcatccagccgcgcgagaaagcccgcgct
gcttacgaacaggccaaggccagcggacgcaaggccgggctggtggaacagcaacggccc
aacatgttctccaccatggtcgccaatgtcggccccggcgagacggtgctgatcgcgatc
gagtaccaggccccggtggcccaggcgaacggcacgttctcgctgcgcctgccgctggta
gtggggccgcgctacacaccgccccataccctgaattcggatgccgccgtggcggatgcg
aacgcggtcacagccgccccggtgctcgatccgaaggtgggtgcgaaactgagcgggggc
ctcaaccccacctcgatcgcggtgcgccttgcgcccggcttcgatgtcgccaacctcatc
agccgctatcaccgcgtcaatgtgtccggtccgctggacgaccgcacagtccgactggcc
gataccgccgtccctgcggaccgcgacttcgtgctggaatggcgctccgcctcggccgac
cctacgctgggcctgttcgcccagcacaccgcgaagggcgattacctgatggcttccgtg
acgccgcctgccgacctgtccgccctgcccacgcctccgcgcgaaatggttttcgtgatc
gataacagcgggtcgatgggcggagattcgatggacgaagcgaaggccagcctgatccat
gccctgggcacgctgcgcccgcaggaccatttcaacgtaatccggttcgacgacaccatg
acccgcctgttcgagcacagcgtggccgccacgcccgatcaggtcgcactggcgcgccgc
ttcgccgggtcgctcgaagcgcagggtggcaccgaaatgcttcccgccctgcgcgccgcg
ctgaccgatgccggcagcggcggcgggagcgatcccgaggtgctgcgccagatcgtgttc
atgaccgacggcgaaatctcgaacgagcgcgagatgatggctgccatcggcgccgacggc
ggacgtagccatgtgttcatggtcggcatcggttcggcccccaacgactatctgatggag
cgcatgtccaccatcggcggcggcgtctacacccatgtcggcgcaccgggagaagtggcg
gcgaagatgatgccgctgctcgacgtgctgagccatccggcggtgcgcgacctgtcggtg
cgggtggagggcggatcgctcgacctgacgccctcgcgtctgcctgatgtctatgcaggc
cgcccgctggtgctggtgggccgcagcgatcaccttgccggcacccttacggtcagcggc
aggatcggcggcaagctgtgggaacggcgggtagacctggccgccgccctgcccagcccg
gccgtggaaaagctctgggcccgtcgccgcatcaccgacatcgaggcggaccgcgcgcta
ggcaagctggacgatacggcggcagacgccgaagtcgaacgggtgggcatggaaaacggt
atcgtcactagccgcaccagccttgtcgccgtggatgaaacgcgctcgcgccccgacggc
gcccccctgacccgcgaggaactgccgatcaaccttcccgcaggctgggatttcggccac
ctgttcggacaggcggcgcagcgcaccgcagtcggggacggttcaggcgatcttgccgcc
atgcaggcgcaggcgctggaactgccgcagaccgccaccggcttcctcggcgtgatcggc
aagggctgtgcgctcctgctggcgggccttgccgggttcgccgtgctgatgcgccggagg
gcggcatga
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