Novosphingobium sp. P6W: TQ38_021960
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Entry
TQ38_021960 CDS
T05550
Name
(GenBank) TonB-dependent siderophore receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
nov
Novosphingobium sp. P6W
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nov02000
]
TQ38_021960
Transporters [BR:
nov02000
]
Other transporters
Pores ion channels [TC:
1
]
TQ38_021960
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
Motif
Other DBs
NCBI-ProteinID:
AXB79186
LinkDB
All DBs
Position
2:1292394..1294781
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AA seq
795 aa
AA seq
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MTQFPTSTSCIAVALATLSAVVPGIAAAQANNAQAADASRAIAIERGPLGAAIARLGRQA
GVVIVADPAVLRGRFTPGVRGRFTPGEALARLLAGTGLSARPDGDGGFMLVSGAETASAG
GEDVPSDITVMGNRAVTATKTDTKLTETPQSISAITGEQIAARGAIGLQEALRYTPGLRT
EPNGVDNRWDYVTARGGFPAAQFVDGMKRADISAAPRTDVYTFERVEVLRGPSSVLYGQG
AAGGIINTISKRPEFRTAGEMAVQYGTFDRKQAQVDVTGALDANGTLAARFVGVVRDSGN
QVDFGRDDRIALTPSIRFQPDENTDITLLGLYQRDKAAAISAYVPVVASVNAPAGRRLSR
SAFLGEPGHDYYDTEEKSATLLVTHRFSDAIRYSGAVRYSRYKSDNGTVNLSVWSGLENP
FIDAANTQIERTVFDFRSRVNMLTTDHNLTFDFATGPFEHKVLVGIDYLRSSARTDYAFG
AAGPIDIYAPVYTGVEMGAFDPQPRQVASQLGIYVQDQIRYADRVTLVLGARRDRARTVN
EGVDRQVDTVTTFRAGLIGDLGSGIAPYVSYSESFQPTLGLNVYGEAYLPQRGTQYEVGV
KWQPTPAILASIAAFDVKGTNRLQTDPTNVNNQIQQGEVKSKGIEVEAAWTVARDFTLSA
SYAYVDAEIKKATDPLEVGAPIPTVAKHSAGIWGEKSLDLGGDTGLRLGGGVRYVGPTNE
LAVYQDDAGGSVIDTQRTPGYTLVDALLALDWKQWSLAVNATNLFDKTYYSSCSVRSACG
TGYARTVIGTLGYRF
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgacccagtttccgacttccacctcctgcatcgccgtcgccctggccaccttgtccgct
gtggtacccggcatcgcggctgcgcaggccaataacgcgcaggccgcggacgcttcgcgc
gctatcgcgatcgaacgtgggccgctgggcgctgccatcgcgcggttggggcggcaggcg
ggcgtggtgatcgtggccgatcctgcggtgctgcgcggacgcttcacccccggcgtgcgc
ggacgcttcacccccggcgaggcgctggccaggctgctggccggcaccgggctttccgcc
cgccccgatggcgacggcggcttcatgctggtcagcggcgctgagaccgcgtctgccggt
ggcgaagatgtccccagcgacatcaccgtgatgggcaaccgcgcggtaaccgccaccaag
accgacaccaagctcaccgaaacgccccagtcgatcagtgccatcaccggcgagcagatc
gccgcgcgcggcgccatcggcttgcaggaagcgctgcgctacacgcctggcctgcgcacc
gaacccaacggcgtcgacaaccgctgggactacgtaactgcgcgcggcggctttcccgcc
gcgcagttcgtcgacggcatgaagcgcgccgacatctcggccgcgccgcgcaccgatgtc
tacaccttcgagcgagtcgaggtgctgcgcgggccgtcctccgtgctctacggacagggc
gcggcgggcggcatcatcaacacgatttccaagcggccggaattcaggaccgctggcgaa
atggcggtccagtacggcactttcgaccgcaagcaggcgcaagtcgacgtaaccggcgcg
ctggacgcgaacggcaccttggccgcccgattcgtgggcgtagtgcgcgattccggcaat
caggtggacttcggccgggatgaccgcatcgccttgaccccctccatccgcttccagccg
gacgagaacaccgacatcaccctgctgggcctataccagcgcgacaaggctgctgcgatt
tccgcctatgtgccagtggtcgccagcgtcaacgcgcctgcgggacggcggctttcacgc
agcgccttcctgggtgagcccggccacgattattacgacaccgaggagaagagcgccacg
ctgctagtgacgcaccgtttttcggacgccatccgatacagcggcgcggtgcgctacagc
cggtacaaatcggataacgggacggtcaatctctccgtctggagcgggctggaaaacccc
ttcatcgacgccgcgaacactcagatcgaacgcacggtgttcgattttcgcagccgggtg
aacatgctcaccaccgaccacaacctgaccttcgatttcgcaaccggcccgttcgagcac
aaggtgctggtcggtatcgactacctgcgcagttccgcccgcaccgattatgccttcggc
gccgccgggccgatcgacatctacgcgcccgtctataccggcgtcgagatgggcgccttc
gatccccagccgcgccaggtcgccagccaattgggcatctacgtgcaggaccagatccga
tatgccgaccgggtaacgctggtactgggcgcaaggcgcgaccgggccaggacggtgaac
gaaggcgtcgaccggcaggtggataccgtcaccacctttcgcgccgggctgatcggcgac
cttggcagcggcatcgcgccttacgtcagctattccgaatcgttccagccaacgcttggc
ctcaatgtctacggcgaggcctatctgccccagcgcggcactcagtacgaagtgggtgtg
aagtggcagccgaccccggctatcctcgcctcgatcgcggccttcgacgtcaaaggcacc
aaccggctgcagaccgacccgaccaacgtcaacaaccagatccagcagggtgaggtgaag
tcgaaaggcatcgaggtcgaagccgcatggacggtagcgcgcgacttcacgctgtctgcc
tcatatgcttatgtcgacgccgagatcaaaaaggccaccgacccgctggaagtcggcgcg
cccatccccaccgtggcgaagcactcggccggtatctggggcgaaaaaagcctcgatctg
ggcggggacacgggcctgaggctgggcggcggcgtgcgttatgtcgggcccaccaacgaa
ctggcggtctatcaggacgatgcaggcggcagcgtgatcgatacccagcgtaccccgggc
tatacgctggtggacgccttgctcgcgctcgactggaagcagtggtcactcgcggtcaat
gccacgaacctgttcgacaaaacctattattcgagctgttcggtgcgttcggcctgcggc
accggctatgcccgcaccgtgattggcacgctgggctacaggttctga
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