Novosphingobium sp. P6W: TQ38_022750
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Entry
TQ38_022750 CDS
T05550
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
nov
Novosphingobium sp. P6W
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nov03000
]
TQ38_022750
Transcription factors [BR:
nov03000
]
Prokaryotic type
Helix-turn-helix
LysR family
TQ38_022750
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_20
HTH_5
HTH_30
HTH_24
MarR_2
HTH_8
MarR
HTH_psq
HTH_23
HxlR
NUMOD1
Motif
Other DBs
NCBI-ProteinID:
AXB79316
UniProt:
A0A2Z5EIF2
LinkDB
All DBs
Position
2:complement(1488692..1489675)
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AA seq
327 aa
AA seq
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MCHMRFGPNARSRPMHPGNGDHRRRSPNQNRGSVSVNFLHLRSFYAVASERSVSKAARRL
NISQPTLSKQLKALEDRYKVKLIEGMRPPLTLTTAGRALYEKAERLFGIADEIGQLLGED
DIDSGALLRLGTDSPPYAAEFMAAFQAAVPGAHFRVTIANAVQTNELLLKAQVDIGIICE
PPVQNDYTYAPLYQDRLVAIVPAAWPDDNARALPLERISQEVVLVREATSRTLAAMNRLL
ADAGIAPGRTMEFHTREMIREAVAHGLGISLMFAKECPPDERIRVLPLETSSSLIDVKGY
LAVRTERKRMPLIRQSLDIARALSGRA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcacatgcggtttgggccgaacgcccgatcaaggccaatgcatccggggaatggc
gaccatagacggcgcagcccaaaccagaaccgagggtccgtgagcgtcaatttccttcac
ctgcggtcgttctacgccgtggcgtccgaacgcagcgtcagcaaggctgcgcggcgcctg
aacatctcgcaaccgaccttgtccaagcagctcaaagcattggaagaccgctacaaggtc
aagctgatcgaaggtatgcgcccgccgctgacactcacgaccgccggccgagcgctgtac
gaaaaggcagagcgtttgttcggcatcgccgacgagatcggccaactgctgggcgaagat
gatatcgatagcggcgcgctgctgcgcctcggcacggattccccgccatatgccgcggag
ttcatggcagcgttccaggccgccgtccccggtgcgcactttcgcgtcacgatcgcgaat
gcggtccagaccaacgaattgctgctcaaggcccaggtggacatcggcatcatatgcgag
ccacctgtgcagaacgactatacatatgcaccgctgtatcaggacagactggtcgccatc
gtgcctgccgcctggccggacgacaatgcccgcgccttgccgctggagcggatcagccag
gaagtcgtgcttgtgcgtgaagcgacttccaggaccctggcggcaatgaatcgcctgctc
gcggacgccgggatcgctccgggccgaacgatggagtttcacacccgcgagatgatccgc
gaggcggtcgcccatggccttggcataagcctgatgttcgccaaggaatgcccgcccgac
gaaaggatacgggttctcccattggaaacgtcgtcttcgctcattgatgttaagggctat
ttggccgtccggacggagcgaaaacgaatgccgcttattcggcagtcgctggatatcgcg
cgcgcattgagcgggcgcgcctga
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