Novosphingobium sp. P6W: TQ38_023015
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Entry
TQ38_023015 CDS
T05550
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
nov
Novosphingobium sp. P6W
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nov02000
]
TQ38_023015
Transporters [BR:
nov02000
]
Other transporters
Pores ion channels [TC:
1
]
TQ38_023015
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
BBP2
Motif
Other DBs
NCBI-ProteinID:
AXB79362
LinkDB
All DBs
Position
2:1567789..1570053
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AA seq
754 aa
AA seq
DB search
MIQMKNGLLLAASVLALSATPARAQSAPPPEAQAEEKTVGIGEIIVTARQRSESLQTVPV
AVAAMDAAMIERSFIPDVDSIEKFMPNVELGRHPFTGGGMSASIRGISFGDLDRAFEPAV
AVSVDGVFLASNTGAMMDTFDIEAIEVLRGPQGTLFGRNTIGGVISIKRTKPTMDWGLKG
QVTVGSYNVREYKAIANIPIVADTVGLKVGGYRERSDSFTRRVSDGKREDGIDRYSIFGA
LRFNPGSAFDATLSVDRIQDRSHYPSLVPISAANQTFCIAFGACIGTQGQQIADSGNKLA
LDDYPFYARLQHTAVTLNAKLDVIDGISIESITNYTRQKDGLNIENTGAAPLANGAHVFV
SKRDQKASQFSQEVRAISSFGGVFDFVAGLYYMKSKFDLVQTVEVAGTRSQFFDAGQDLN
AYAAYAEAYIEPVDRLRLTVGGRYTHEKKDFYIRFRNPATGVITGQCPDAASLYGPCADP
SVTFRKFTPRVTLDFRFTPDIMVYAGWSRGYRSGGWNSRATVTTAIGPYQPETVDSYEAG
LRTTFWENRARANITVFRAEYKDKQEEVITASPINPLITQTQVQNASSATLQGFEGEFQL
APTDWLNLRAAVGYIDGKYDEFLSAGVDVKDQRNLRYAPKWSVSFGGDATIPLEATGGEI
LLNANYKWTDRFATSIIRDTTGFNRDFIDAYATVDASIGYRHELGDRKTVSLSAFVQNAF
HSDGRLYRKVITGPFAFASREVARTWGISLGFTY
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgattcagatgaaaaacggccttctgctcgccgccagcgtcctggctctgtccgcaacg
cccgcccgggcgcagtcggcgcccccgccagaagcccaggcggaggagaagaccgtcggc
atcggtgagatcatcgtgaccgcccgtcagcgctcggaatcgctccagacggtgcccgtc
gcggtggcggcgatggatgccgcgatgatcgaacgcagcttcatccccgacgtcgattcc
atcgagaagttcatgcccaacgtggagcttggccgtcaccccttcaccggcggcggcatg
tccgcctcgatccgcggcatcagcttcggcgatcttgaccgcgcgttcgaaccggccgtg
gccgtctcggtcgacggggtgttcctggcttccaacaccggcgcgatgatggacacgttc
gacatcgaggcgatcgaagtcctgcgtggcccacagggcaccttgttcggccgcaacacc
atcggcggcgtcatcagcatcaaacgcaccaagccgacgatggactggggcctcaagggc
caggtcacggtgggcagctacaacgtgcgcgaatacaaggcgatcgccaacattccgatc
gtggcggacacggtcggcctcaaggtgggcggctaccgcgaacgcagcgacagtttcacc
cgccgcgtcagcgacggcaagcgtgaggacggcatcgatcgttactcgatcttcggggcg
ctgcgcttcaatcccggttcggccttcgacgccacattgtcggtggaccgcatccaggat
cgctcgcactacccgagcctggtgccgatttccgccgcgaaccagaccttctgcatcgct
ttcggcgcctgcatcggcacccagggacagcagatcgccgacagcggcaacaagctcgcg
cttgacgattacccgttctatgcccggctccagcacaccgccgttaccctgaatgccaaa
cttgacgtgatcgacggcatttcgatcgaatccatcaccaactataccaggcagaaggac
ggcctgaacatcgagaataccggcgccgcgccgctggcgaacggcgcccacgttttcgtg
tcgaaacgcgaccagaaggccagccagttcagccaggaagtgcgcgcaatcagcagtttc
ggcggcgtgttcgatttcgtcgcggggctctactacatgaaatccaagttcgacctcgtc
cagacggtagaagtcgcgggtacgcgctcgcagttcttcgatgccgggcaggatctgaat
gcctacgcagcttatgcggaagcttacatcgagcctgtggaccggctgcgcctcaccgtc
ggcgggcgctatacgcatgagaagaaggacttctacatccgcttccgcaatcccgcgacg
ggcgtaatcaccggccagtgccccgatgcggcgtcactgtacggaccgtgtgccgaccct
tccgtgacgttccgcaagttcacgccgcgcgtcacgcttgatttccggttcactccggac
atcatggtctacgcgggatggtcgcgcgggtatcgttcgggcggctggaacagccgggcg
accgtgacgactgcaatcgggccgtaccagcccgaaacggtcgacagctacgaggcgggc
ctgcgcaccactttctgggaaaaccgggcgagggccaacatcaccgtcttccgcgccgag
tacaaggacaagcaggaggaggtcataaccgcctcgccgatcaacccgctcatcacgcag
acacaagtacagaatgcatcttccgcgacgttgcagggcttcgagggagagttccagctg
gcgccgaccgactggctgaacctgcgagcggcggtcggctacatagatggcaagtacgat
gagttcctgtcggccggggtggacgtcaaggaccagcgcaacctgcgttatgctcccaag
tggtcagtcagcttcggcggcgacgcgaccattccgctggaggcgacaggcggcgagata
ctgctcaacgcgaactacaaatggacggacaggttcgccacgtcgatcattcgcgacacc
accggcttcaatcgcgatttcatcgatgcttatgccacggtcgatgcatcgattggttac
cgtcatgaacttggcgaccgcaagacggtgagcctttccgccttcgtccagaatgcattc
cacagcgacgggcgtctctaccggaaagtcatcaccgggccgtttgctttcgcgagccgg
gaggtcgcaagaacttggggcatttcgctgggcttcacatactga
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