Novosphingobium sp. P6W: TQ38_023140
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Entry
TQ38_023140 CDS
T05550
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
nov
Novosphingobium sp. P6W
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nov02000
]
TQ38_023140
Transporters [BR:
nov02000
]
Other transporters
Pores ion channels [TC:
1
]
TQ38_023140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CelD_N
Motif
Other DBs
NCBI-ProteinID:
AXB79380
LinkDB
All DBs
Position
2:complement(1606584..1608752)
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AA seq
722 aa
AA seq
DB search
MLGSRSIVRLTTLAAAAGASVSGPAVFAQEADIVVTAQRENETQVLRQGSLGALGSKDAL
QVPFAIKGYSETLILNQQPLTLGQVLENDPSVRTSLGFGNASEQFIIRGFPLYGEDIAID
GLYGVTPRQLVSPELYDQVQILNGASAFLFGAAPGGTALGGTVNLQPKRAKDQPINRLTV
NYQSDAHFGGAFDFSRRFGEESQFGVRINGAGRAGDTAINDEFRSSVVTGAAFDWRSDRA
RLSLDLAFQRVKVRHMRPMVQLANTVTALPDVPDADSNYGQDWNYTTIRDVFGIVKFEYD
ISDDILFYSAAGARDTAERGQYQSFTVVNAATGAARVTGSTIPRNDNNEAAQVGVRGKFA
TGPITHEFNLGGSHSRYVNRNAYGFSPSVTAPNTSLYDPVDLAVPNFNGGLQGGNRADPF
PVNRTRLTSFFVSDTIGAFDHKVELTVGLRRQQIHVRTYRANAVTAPAPMPAGSLSVEYK
ESATTPVVGLVIRPAETVSLYANRIEGLVQGPIAGAGTINAGEVFAPFKTVQYEVGGKLA
MGRFNASLALFQTDRPQTLNETTDTFPRFTLNGQQRNKGVELSLDGEPVDGLRVIAGLSV
TDAKQRRTTNGMYDGNNAIGVPEYTANANVEWDLAFLPGVTLTGRVMQTGRQMVNLANTL
ELPEWTRFDLGARYVVAVADKPVTFRFNVDNVANKRYWASSLGGYLVQGMPRVFKTSATV
EF
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgctaggcagtcgcagtatcgtaaggttgaccacgctcgctgccgcagcgggcgcaagt
gtttcgggtccggctgtctttgctcaggaagccgacatcgtcgtcacggcccagcgcgaa
aacgagacccaggtgctgcgccagggaagccttggtgcacttgggtctaaggatgctctg
caggttcccttcgcgatcaagggctatagcgagacgctgatccttaatcagcagccgctt
acgcttggacaggtccttgaaaatgacccgtccgttcgcacctccctcggcttcggcaat
gcttccgagcagttcatcattcgcggctttcccctttatggcgaggatatcgcgatcgat
gggctttacggtgtaaccccgcgccagctcgtctctcccgaactctacgatcaggtgcag
atcctcaacggcgccagcgcgttcctgttcggagcggcgccgggcggcacggcgctgggc
ggcaccgtcaatcttcaaccgaagcgggccaaggaccagccgatcaaccggctgaccgtc
aactaccagtcggacgctcactttggcggcgcattcgatttcagccgccggttcggtgaa
gaaagccagttcggcgtgcgcataaacggtgccggacgagccggcgataccgcgatcaac
gacgagtttcgcagttcggtggtaaccggcgcggcgttcgattggcgcagtgaccgcgcc
aggctatcgctggaccttgccttccagcgcgtgaaagtgcgccacatgcgcccgatggtg
caattggccaacaccgtcaccgccctccccgatgtgccggatgccgacagcaattatggc
caggactggaactacacgacgatccgcgacgtcttcgggatcgtcaagttcgagtacgac
atctccgacgatatcctgttctacagcgccgccggtgcccgtgacactgcggagcggggg
cagtaccagagcttcacggtcgtcaatgcagcaacaggcgcggcccgtgtcaccggctca
acgatcccgcgcaacgacaataacgaagccgcgcaggtcggcgtgcgcggcaagttcgcg
acaggcccgatcacgcacgaattcaacctcggcggatcacatagccgctatgtgaaccgc
aacgcctatggcttttcgccttcggtcaccgcgcccaacaccagcctttatgatccggtc
gacctggcagtgcccaatttcaacggcggcctgcagggcggcaaccgcgccgacccgttc
ccggtgaaccgtactcgcctcaccagctttttcgtatccgacacgatcggcgcattcgat
cacaaggtggagcttaccgtgggcctgcgccgccagcagatccatgtccgcacttaccgg
gcaaatgccgtgacggcgcctgctcccatgcccgccggcagcctgtcggtggaatacaag
gaaagcgcgacgaccccggtggtcggcctggtgatccgccctgccgagaccgtttcgctc
tacgcgaaccggatcgaaggtctggtccaggggcccatcgcgggtgcgggcacgatcaat
gcgggcgaggtgttcgcaccgttcaagaccgtgcagtacgaagtgggcggcaagctcgcc
atggggcgcttcaacgcctcgctcgcgctgttccagacagaccggccgcagaccctgaac
gagacgaccgacaccttcccgcgtttcacgctcaacggccagcagcgcaacaagggcgtg
gaactgagcctcgacggcgagccggtcgacggcctgcgcgtgatcgccggcctttcggtc
acggatgccaagcagcgccggacaacgaacggcatgtatgacggcaacaatgccatcggc
gtgcccgaatacaccgcgaacgccaacgtcgaatgggacctggccttcctgcccggcgta
accctgaccgggcgcgtgatgcagaccggcaggcagatggtgaacctcgccaatacgctc
gaactgccggaatggacgcgcttcgaccttggcgcgcgctatgtcgtcgccgtcgcggac
aagccggtcaccttccgcttcaacgtcgataacgtggcgaacaagcggtactgggcttct
tcgctcggcggctatctggttcagggcatgccccgcgtcttcaagacctcggcaacggtc
gaattttga
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