Novosphingobium sp. P6W: TQ38_024130
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Entry
TQ38_024130 CDS
T05550
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
nov
Novosphingobium sp. P6W
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nov02000
]
TQ38_024130
Transporters [BR:
nov02000
]
Other transporters
Pores ion channels [TC:
1
]
TQ38_024130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AXB79547
LinkDB
All DBs
Position
2:1853135..1856122
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AA seq
995 aa
AA seq
DB search
MLSSAVAARSPHQVSSKGRASRALRHGALLTASLLALSPVIAFAQDTAAPDAGPAGGNDI
VVTGSRIRVPNATSVSPITTVNSEDLAQRGVTRLEDMLNTLPQVYADQGGGNRGGTVGAS
GTATINLRNLGNQRTLVLINGRRLMQGDPARSAAQAADINNVPAALVERIDVVTGGASAV
YGSDALAGVVNFELKKNFEGVQLDASSGVFQHDNGNSIASVAAAAGQDVPTGSTVGGLQQ
SLSVTAGHNFADGRGNVTAFVNYRHIEGVGTSERDFSICNLNATAAGYSCSLSSTTYPAQ
FQLTNPRTGATRGSYTLDPATGNTFRTYRTSDGFNNGNTYDLQAPDERINADLLAHFEVS
SAVELYGELMYMRDKADIRLSPTGVFTVPESINCSNPFLSAQQKNLMCTSVGLTDAQSAT
VNVSLRNAPGGSRHDYTKHTSYRAVGGVRGEIAPGWRYDAYAQYGRTNYSSRLTGDISLA
SFANSLRAVTNSSGQIVCENAADGCVPLNIFSTTGVTADALNYVQGTFTRTGFTEETIVS
GSVTGDIGVSSPFASNPISVALGTEYRKERIGFTADSHYSSRDVAGNSGGEYPISGSFDV
KELYGEVRVPLVEDRPFFKSLAVEGGARYSNYSTAGDTFAWKAGAEWSPVDAIRFRGSFQ
HSVRAPNLVELFGPQRVTTARLTDPCEGASPTATFAQCAQSGVTATQYGTIEPAAGQLSG
VLVGGNPNLKPEKSNTKSFGVQIAPPFLRGLTLSVDYFDIKVDDLITTLPATITLSQCIN
AGTFCDQIQRNPATGSLVTSGYVLATSLNAGYLQTTGIDFSASAKQDLGDLVKADLGTVG
FNFSGTRTNKYEVQIVPGTEAYRCDGYFGVTCGQPIPTWRHRAEFNWTAPSGAIRLAATW
RYIGSTRNDRSSSATFLAGTYQPYDYKLKAVNYFDLAASFDVSGSYTLRLGVSNVFDRDP
PITASTSGQTSNGAFYAGMYDSLGRYLFASVTAKL
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgtctgccgtcgccgcacgttcaccgcatcaggtttcatccaaaggtcgggca
tcgcgtgccctgcgtcatggagcgctgctgaccgcttcgctgctggccctgtcaccggtc
atcgcctttgcccaggacactgccgctcccgacgccgggcctgctggcggcaacgacatc
gtcgtcaccggatcgcgcatccgcgttcccaacgccaccagcgtcagcccgatcacgacg
gtgaacagcgaagacctcgcccagcgcggcgtcactcgcctggaagacatgctcaacacc
ctgccgcaggtctatgccgaccagggcggcggcaaccgcggcggcaccgtgggcgccagc
ggcaccgcgacgatcaacctgcgcaacctgggcaaccagcgcacgctcgtgctcatcaac
ggccgccgcctgatgcagggcgatcccgcgcgttcggccgcgcaggcagccgacatcaac
aacgtgcccgccgccctggtcgagcgcatcgacgttgtgaccggcggcgcctcggcggtc
tatggttcggacgcgcttgcaggcgtggtcaacttcgagctgaagaagaacttcgagggc
gtccagcttgatgccagctccggcgttttccagcacgacaacggcaattcgatcgcatcg
gtcgcagcggcagccgggcaggacgttcccaccggcagcaccgtgggcggcctgcagcag
agcctctccgtaactgccggccacaacttcgccgatggccgcggcaacgtgaccgccttc
gtcaactatcgccacatcgagggcgtcggcacgtccgagcgtgacttctcgatctgcaac
ctcaacgcgacggcggccggctattcctgctcgctgtcctcgacgacctacccggcgcag
ttccagctgaccaacccccgcaccggcgcgacgcgcggcagctacacgctggacccggcc
accggaaacaccttccgcacctaccgcacgtcggacggcttcaacaacggcaacacctac
gacttgcaggcgccggacgagcgtatcaacgccgacctgcttgcccatttcgaggtgtcc
tcggccgtcgaactctacggcgaactcatgtacatgcgcgacaaggccgacatccgcctg
tcgcccaccggcgtgttcaccgtgccggagagcatcaactgctccaacccgttcctgtcg
gcgcagcagaagaatctcatgtgcacttcggtcggcctgaccgacgcgcagagcgccacc
gtcaacgtgtcgctgcgcaacgcgcccggcggatcgcgccatgactacaccaagcacacc
tcgtaccgcgcggtaggcggcgtgcgcggcgagatcgcgcccggctggcggtacgacgcc
tatgcgcagtacggccgcaccaactacagctcgcggctgaccggcgacatctcgctggcc
agcttcgccaactcgctgcgcgcggtgaccaacagcagcggccagatcgtctgtgagaac
gcggcggacggctgcgtcccgctcaacatcttctcgaccaccggcgtcactgccgatgcg
ctgaactatgtgcagggcactttcacccgcaccggcttcaccgaagagacgatcgtgagc
ggatcggtcacgggcgatatcggcgtatccagccccttcgccagcaacccgatcagcgtg
gcgctgggcaccgaataccgcaaggagcggatcggcttcacggccgatagccactactcc
agccgcgacgtggcgggtaactcgggcggcgaatacccgatctccggctcgttcgacgtc
aaggaactctacggcgaagtccgcgtgccgctggtcgaggatcgtccgttcttcaagagc
ctcgccgtcgaaggcggcgcgcgttattcgaactacagcaccgccggcgacactttcgcg
tggaaggcgggcgctgaatggtcgccggtcgacgcgatccgcttccgcggcagcttccag
cactcggtccgcgcgcccaacctggtcgagctgttcggcccgcagcgcgtcaccaccgcg
cgcctgaccgacccgtgcgagggcgccagcccgaccgcgactttcgcgcagtgcgcccag
tcgggcgtgaccgcgacgcagtacggcacgatcgagcctgcggcaggccagctttccggc
gtgctcgtcggcggcaacccgaacctcaagcccgagaagtcgaacaccaagtcgttcggc
gtgcagatcgccccgccgttcctgcgcggcctgacgctgtcggtcgattacttcgacatc
aaggtggatgatctgatcaccaccttgccggccacgatcacgctgagccagtgcatcaac
gccggcaccttctgcgaccagatccagcgcaatccggccaccggatcgctggtgaccagc
ggctacgtactggccaccagtctcaacgccggctatctccagaccaccgggatcgacttc
tcggccagcgcgaagcaggaccttggcgatctggtgaaggcggatctgggcaccgtgggc
ttcaacttctcgggcacgcgcaccaacaagtacgaagtgcagatcgtgcccggcaccgag
gcctatcgctgcgacggctacttcggcgtcacctgcggccagccgatcccgacctggcgc
caccgcgccgaattcaactggactgcgcccagcggcgccatccgcctcgcggcgacgtgg
cgctacattggcagcacccgcaacgacaggtcgagcagcgcgacgttccttgccggcacc
taccagccctacgactacaagctgaaggcggtgaactacttcgatctggccgcttcgttc
gacgtatccggttcgtacacgctgcgtctgggcgtgagcaacgtcttcgaccgcgatccg
ccgatcaccgccagcaccagcgggcagacgtcgaacggcgcgttctatgcgggcatgtac
gactcgcttggccgctatcttttcgccagcgtgaccgccaagctctga
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