Novosphingobium sp. P6W: TQ38_024815
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Entry
TQ38_024815 CDS
T05550
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
nov
Novosphingobium sp. P6W
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nov02000
]
TQ38_024815
Transporters [BR:
nov02000
]
Other transporters
Pores ion channels [TC:
1
]
TQ38_024815
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Paralog
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
PorP_SprF
Motif
Other DBs
NCBI-ProteinID:
AXB79660
LinkDB
All DBs
Position
2:2018953..2021436
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AA seq
827 aa
AA seq
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MFTMRLHGSTCAFAIVAALASASSRAQDTAAADTATPQASTTSAGSGLAEIVVTATRRAT
DLQSTPVSVSAVDSTLIAQASPRDLGDIAAFVPNFSAATIANFNAASFAMRGVGQTSIIV
YFEPPVAVLVDDFVVPSVQTQLLDTFDVAQVEVLRGPQGTLFGKNTTGGVVTVRTKRPQM
EYVGVDARAEFGDFGQKKVQAAMNVPIGDIAALRLVGGYEKSDGFYHNGACYGPVTGFVP
NKFEGSTGCLGGERLGGKDVWQARAKLLIEPSPDFSALLQYEWIRDRSDSVPSVNENYLY
TGTNPFVTDLLGLTDPNAQNVDPLKRAGYTGRHDGLLYMDQGQRISVDGLYANLEYDTGI
GTISSVTGYRKQKSRIPNSYAGATALGSDGQLLSFFDATRDDDRKTFQQELRFSSDFKGP
FNFVAGGFFQRDKIDFCVSQILGFLDLTSGPLPFGEWNNTPYILCNAQKAKSRALFFEGT
LKLGEKLTIAAGGRYTWDDKTWMGRQQTFIPALNGGFDPTISIDHALDASVYKYPAGVVT
VKDKWREPTYRASISYQATDDVFVFGGYSHGYKGGGFNDQIGGFAAFGDDLDAFRAAARA
TNPETADSFEVGFKSQFLDNRVRFNVTSFYVKYKDLQKQLNVPIVVNGQPNQVTIFVNAA
SATVKGLEGELSATPVEGLTLRGVLGYQDGKYKSYTAENAGYDLASAPLDRAPKWQWTAD
AVYSVPLGDDYKLTLNGNVAYTGRNLNTQAIDDPRGNTFLNARTLVNGSITLAQTDDKYY
VRVIGRNLTDKRYRIASQNVAGLWLNSQFGAPRYFGVELGLSFGNHL
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgttcaccatgaggcttcatggctcgacgtgcgcattcgctattgttgcggcgctcgcc
agcgcttcttcccgcgcgcaggataccgctgccgcagacaccgctaccccgcaggcgagc
acgacatcggccggttcggggctggctgaaatcgtcgttaccgccacccgccgggccacc
gatctgcagtctactccggtctcggtttcggcggtggactctaccttgatcgcacaggca
tcgccgcgcgatcttggtgatatcgctgccttcgtgccgaacttctcggctgcgacgatc
gccaatttcaacgccgccagcttcgccatgcgcggcgtcggccagacctcgatcatcgtc
tacttcgagccgccagtcgcagttcttgtcgacgacttcgtggtgccttcggtgcagacc
cagctcctcgataccttcgacgtggcgcaagtcgaagtgttgcgcggcccgcaaggcacg
ctgttcggcaagaacaccaccggcggcgtcgtcaccgtgcgcaccaagcggccgcagatg
gagtatgtcggcgtcgatgcgcgcgccgaatttggcgacttcggacagaagaaagtccag
gccgcgatgaacgttccgatcggtgacatcgccgcgctgcgtctggttggtgggtacgaa
aagtctgacgggttctaccataacggcgcctgctacggcccggtcaccggctttgtgccg
aacaagttcgaaggctctaccgggtgtctgggaggcgagcggcttggcggtaaggacgtg
tggcaggcccgtgccaagctgctgatcgaaccttcgcccgatttcagcgcactgctgcag
tacgagtggattcgcgaccgttcggattcggtcccttcggtaaacgagaattacctctat
accggcaccaaccctttcgtgaccgaccttctggggctgaccgatcccaatgcgcagaac
gtcgatccgctgaagcgcgcgggctacaccgggcgacatgacggcctgctttacatggat
caaggccagcgtatctcggtagacggactttacgccaatctggaatacgataccggcatc
ggcactatcagttccgtcactggctaccgcaagcagaagtcgcgtatccccaactcctat
gcaggcgcgaccgcactgggcagcgacggccagctgctttcgttcttcgatgccacccgc
gatgacgatcgcaagaccttccagcaggaactgcgcttctcgtccgacttcaagggtccg
ttcaacttcgttgcgggcgggttcttccagcgcgacaagatcgacttctgcgtctcccag
atcctcggcttccttgaccttacttcgggaccgctgccgtttggagagtggaacaacacg
ccttacatcctgtgcaatgcccagaaggcgaagtcccgcgcgctgttcttcgaaggcacg
ctcaagctgggcgaaaagctgacgatcgcggcgggcgggcgctatacctgggacgacaag
acctggatgggccgccagcagaccttcatcccggcgctgaacggcggtttcgatccgacg
atttccatcgaccacgcgctggatgccagcgtctacaagtaccccgccggtgtggtgacg
gtgaaggacaagtggcgcgagccgacctaccgcgccagcatcagctatcaggcgaccgac
gacgtgttcgtcttcggcggctattcgcacggttacaagggcggcggtttcaacgaccag
atcggcggcttcgcagccttcggtgacgatctcgacgccttccgcgccgccgcgcgcgcc
accaacccggaaacggccgacagcttcgaggtgggcttcaagtcgcagttcctcgacaac
cgcgtacgcttcaacgtcaccagtttctacgtgaagtacaaggatttgcaaaagcagctc
aacgtgccgatcgtagtcaacggtcagcccaatcaggtgacgatcttcgtcaacgcggcc
agcgccaccgtgaaggggcttgaaggtgaactttcggccacgccggtcgaggggctgacc
ctgcgcggtgtgctcggttaccaggacggcaagtacaagagctacaccgccgaaaacgcc
ggctacgatctggcgagcgcgccgctggaccgtgcgcccaagtggcagtggactgcggac
gcggtctactcggtgccgctgggggatgattacaagctcacgctgaacggcaacgtcgcc
tacaccgggcgcaacctgaacacgcaggcgatcgacgatccgcgcggcaatacgttcctc
aacgcacgcacgctggtgaacggatcgatcactctcgcccagacagacgacaagtattac
gtccgcgttatcggcaggaacctgaccgacaagcgctatcgtatcgcttcgcagaacgtg
gcgggcctgtggctcaactcgcagttcggtgcgccgcgttactttggcgtcgaactgggc
ttgtccttcggcaatcacttgtaa
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