Novosphingobium sp. P6W: TQ38_025360
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Entry
TQ38_025360 CDS
T05550
Name
(GenBank) type I polyketide synthase
Organism
nov
Novosphingobium sp. P6W
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
KR
Ketoacyl-synt_C
Thioesterase
PS-DH
CurL-like_PKS_C
PKS_DH_N
Beta-ketacyl_N
KAsynt_C_assoc
PP-binding
RhiE-like_linker
adh_short_C2
adh_short
Motif
Other DBs
NCBI-ProteinID:
AXB79753
LinkDB
All DBs
Position
2:complement(2146349..2152858)
Genome browser
AA seq
2169 aa
AA seq
DB search
MYRNDEHFEGEFPAAGGEEPENAIAIVGMSCRFAGARGIDAYWDLLRGGVEGIEHYSEEA
LLAAGADPRMIARPNYIRAGAPLADMECFDNALFGLSPRDAAIMDPQHRHFLECAWEAME
DAGHVADRVPGAIGVFGGTGHNAYLFSNLLTNPKLVRDVGPFLLRHTGNDKDFLSTRVSY
LLNLKGPSVNVQTACSTSLVAIHSAVQSLLNRECDMALAGAASIELPHAQGYLYEEGEIT
SADGHCRPFDADSTGAVFGSGVGIVVLRRLEDALADNDHIYAVIRGSAVNNDGSGKVSYL
SPSVDGHAGVVSEALDVAQVDARSVGYVEAHGTGTRVGDPIEIAALSQAYRRHTADTGFC
RIGSVKGNIGHTDTAAGVASVIKVGLSLHHGAIAPTLHYSRPNPACEFADSPFSVAGEFQ
PWPRLPGKPRRAGVSSLGVGGTNAHVIMEEAPPRAPGSAGRPWQVLTLSAQTTTALEANA
AALSDHLRANPKVNLADVAFTLSTGRKSLAYRRIIVAHGATQAAEALAQPVTGKPRKAVT
GSANRSVSFLFCGAGAQYAGMGAELYASEPQFRAVIDECLSHLGREEGEALKGWLYPDAQ
NGEQAALAMQRPSIALPLLFSVQVALARLWMSWGVTPSAMIGHSSGEYAAAHLAGVLSLS
DALTIVRARGRLFETVPGGAMLSVPMAEADVAALLPPELSIAAVNGPKLAVVSGPAAAIA
AFAEELTAREVETQTVGISVAAHSAMLDPVLDAFRNVLATVRFSPPTLAFVSNLTGDWIT
AAQATDPEYWVTHLRQPVRFTDGLARLLGDPDRVLLEVGPGRVLSSLARQHPDRNADLPV
LNSLPHKDERKSGDLAHVLDTLGNLWAAGVTPDWDAYWAAERRCRLPLPTYRFDRQRHWY
EPATAAMAALEPEVAPDQPLPRAADMADWLYEPIWHRAAQEAVPAQDGVTLVFEDNAGLG
AEIAATLRGQGHRVISVRPGRRFRQLGDETFEINVRAAEDYSRLATTLADRDLSPARVYH
LWLVTGEATHDAAALQDLGLHSLVFLTQALGEGDAGPIAVTVVSDGVQRVCDEEGMVPAK
ATILGACRVIPREYPEIRVRSVDIRLPRRNGAAWATLRDMLIAESAQPDDAEVIAYRASE
RWTASFAAARAPVNPQIPADIQLKQEGVYLITGGLGGLGMVMAGHLARTRKARLALLARR
ALPPRAQWQDIMARAGADPVARTIRKVRAIEAAGGEVMLIVADVCNVRGVRRAVKQIHQQ
WGPIDGVFHTAGVIDDGLLQLKTRSSIDRVLSPKLHGTLALDAALKDERPEFMLLFSSIS
AFAGIPGQVDYAAANAFLDAYAQSRRDDVTNVVSIAWSRWQDVGMAADLAEQAATDRATA
PLGAGEAMDHPFLHAMHRLSPSEVIAEGTLSPDHHWLLDEHRLADGSALIPGTGFLELAR
AAFDSLEAGPSELADILFLAPFAVPDGESRTLRIHMHQERDGDWHFAILGRAANGAADQG
WTEHVRGTVRRLAAAPIAPQDVPALLQRMPAQGNAEALVDASSMMRFGPRWRSVRQLRIA
DGEAVLELALDRRFAHDLAHIALHPALLDFATAGAQCLIPGRRPGQDFFAPASYGAIKLY
HACPAHLFSHVRCRPATSDAIAVFDVTLLDPQGRVIAEIAEFTMLRLSDSARLSGAETPA
PRAASKPLPVEPASDGLVSAEGVAIVERILAGVPASHVIISPTDLHQTLDRIRAPYKPAA
TFERDDEAPGGDPPATAAERIIAEIWSEMLGVRHIQRSDDFFDLGGHSLLGVQFMNRLRK
RTGKQLPLATLLESTTVEKLGRLIDPEGAAAVGSSEAPEEEGAANRKIITIRPGSRKTPL
FLVHDGLGETLLYRALAMRMDPDRPVMGIEPDVYAGGAYLHTSITEMASAYIVRMQTVQP
HGPYLIAGLCAGGVIAFEMARQLQDMGETTAFVGIVDAADVEAHKRSFYITRTRIQRVRA
LLRGDAGGPPPSVGLLMRRAANAVVYDVSTRLEWMSRTRKVARMAEGPSAANDDVQVAAP
KLSFLHLYEVAHRAHRPGGLFEGGEVVLFKAMQGTGADDDVPYSDLYTDCIFGWGKRVEG
DVTVVSVPGGHSSVLQEPNVDVLAGAMREAIARARPGEDVVQEPIPIMPAASAPVDFGRR
PETAQLQVQ
NT seq
6510 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgcaacgacgagcatttcgagggggaattccctgccgctggcggcgaggaaccc
gagaacgcaatcgccatcgttggcatgtcctgccgttttgccggggcgcgggggatcgac
gcctattgggatttgctgcgcggcggggttgaagggatagagcactattccgaggaagcc
ctgctcgccgccggggccgatccgcgcatgatcgcacggcccaactacatccgcgccggt
gcgccgctggccgacatggaatgcttcgacaacgccctgttcgggcttagcccgcgcgat
gccgcgatcatggacccgcagcaccgccatttcctggaatgcgcctgggaagcgatggag
gatgccggccacgtcgcggaccgggtgccgggggcgatcggcgtcttcggcggcaccggc
cacaacgcctatctgttcagcaacctgctgacgaaccccaagctggtccgcgatgtcggg
ccgttcctgctgcgccacaccggcaacgacaaggatttcctgtcgacccgcgtatcgtac
ctgctcaacctcaaggggccgagcgtcaacgtccagacggcctgctcgacctcgctggtg
gcgatacatagcgcggtgcagagcctgctgaaccgcgagtgcgacatggcactggcaggc
gccgcctccatcgaactgccccatgctcagggctacctctacgaagaaggcgagatcacc
agtgcggacggccactgccgccccttcgatgcggattcgacgggcgctgtcttcggcagc
ggggtgggtatcgtcgtgctgcgccggcttgaagatgcattggccgacaacgaccatatc
tacgcagtgatccgcggctctgcggtcaacaacgacgggtcgggcaaagtcagctacctc
agccccagcgtggatggccatgccggcgtggtcagcgaagcgctcgacgtggcgcaggtc
gatgcccgcagcgtcggctatgtcgaggcacacggcactggcacccgcgtgggcgatccc
atcgaaatcgccgcgctaagccaggcttatcgccgccataccgcagacaccggattctgc
cgcatcggctcggtgaagggcaacatcggccataccgatactgccgccggggtggccagc
gtcatcaaggtgggcctgtcgctgcaccacggcgccatcgcgcctacacttcactattcc
cggcccaacccggcctgcgaatttgcagacagccccttttcggtagccggcgaattccag
ccctggccccgccttccgggcaagccgcgccgcgcgggtgtcagctcgctcggcgtcggc
gggaccaacgcgcacgtcatcatggaagaagcgccgccgcgtgcgcccggcagtgccggc
cggccgtggcaggtacttaccctttccgcccagacgactacggcgctggaggccaatgcc
gccgctctgagcgatcacctccgggcgaacccgaaggtaaacctcgctgatgtcgcattt
actttaagtacaggccgcaagtcactggcatatcgccggattattgtagcacatggtgca
acgcaagctgccgaggctctggcccaaccagtcactggaaagccgcgcaaagccgtcacc
ggcagcgcaaatcgttcggtatccttcctgttctgcggtgccggcgcgcaatatgccgga
atgggcgcagaactctatgccagcgagccgcagttccgcgccgtgatagacgaatgcctg
tcccatctgggacgcgaggaaggcgaggccttgaagggctggctctacccggatgcgcaa
aacggggagcaggcggcactggcaatgcagcgcccctccatcgcgctcccgctgctgttt
tcggtgcaggttgcgctggcgcggctgtggatgtcctggggagtgacgcccagcgcgatg
atcggccatagctcgggcgaatatgccgccgcacacctggccggcgtgcttagcctttcc
gacgccctgactatcgtgcgcgcccgtggccgcctgttcgagacagtgcccggcggcgca
atgctcagcgtgccgatggccgaggctgacgtggcggcgctgctgccgcccgaactttcg
atcgcagcggtcaacgggcccaagctggccgtagtatccggccctgccgccgctattgcc
gctttcgccgaagaactgaccgcccgcgaagtggaaacccagaccgtaggcatttcggtg
gcggcgcattcggccatgctcgacccggtcctggatgcgttcaggaatgtgttggcgaca
gtcaggttcagcccccccaccctcgctttcgtctcaaacctgactggcgactggatcacc
gccgcgcaggcgaccgacccggaatactgggtaacgcacttgcgccagcctgtccgcttc
accgacggtctggcgcggttgctgggcgatcccgaccgcgtgctgctggaagtcggcccc
ggccgggtcctttcaagcctcgcccgccaacaccccgaccgcaatgccgacctgccggtc
ctcaacagcctgccccacaaggacgagcgcaagtcgggcgatctggcccatgtcctcgat
acgctgggcaacctctgggctgccggcgtcaccccggactgggatgcttactgggcagcg
gaacggcgttgccgcctgcctttgcccacttaccggttcgatcggcagcggcactggtac
gagccggccacggccgcgatggcggctttggagcccgaggtcgcgcccgaccagcccctg
ccccgcgctgcggacatggccgactggctttacgagccgatctggcaccgcgcagcccag
gaggcagtccccgcgcaggacggtgtaacgctggtgttcgaggacaacgccgggcttggc
gccgaaattgctgccaccctgcgcggacaaggccaccgcgtcatctccgtgcggccggga
cggcgctttcgccagctgggcgacgagacgttcgaaatcaacgtccgcgccgccgaggac
tacagccgtctggccacgacgcttgcggatcgcgatctctcaccggcccgcgtctatcac
ctctggctggtaaccggcgaggctacgcacgatgccgccgccttgcaggacctggggctg
cacagtctggtcttcctgacccaggcgctgggcgaaggcgacgccggcccgattgcggtg
accgtggtttccgacggcgttcagcgcgtctgcgacgaggaaggtatggtgcctgccaag
gccaccatcctcggcgcctgccgcgtcatcccgcgtgaatatcccgaaatccgggtgcgc
agcgtcgatatccgcctgccccgccgcaacggcgcggcctgggccaccctgcgcgacatg
ttgatcgcggaaagcgcacagccggacgacgccgaagtcatcgcctatcgcgcttccgag
cgttggacagccagctttgccgcagcccgggcgccggtcaacccgcagataccggccgat
atccagctcaagcaggagggcgtttatctgatcaccggcggccttggcgggctgggcatg
gtgatggccgggcaccttgcacggacccgcaaggcccggttggctctgttggcacgccgc
gccttgccgccgcgcgcgcagtggcaggatatcatggcccgcgctggagccgatccggtg
gcccgcacgatccgtaaggtccgcgcgatcgaggcggccgggggtgaggtcatgctgatc
gttgccgatgtctgcaacgttcgtggggtgcgccgggcggtgaagcagatccaccagcaa
tggggcccgatcgacggcgtgttccacacggctggcgtgatcgacgatggactgctccag
ctcaagacccggtcatcgatagaccgcgtgctgtcgcccaagctccatggcacgcttgcg
ctggacgcggccctcaaggatgagcggcccgaattcatgttgctgttctcgtcgatcagc
gcttttgccgggattcccgggcaggtcgactatgcagcggcgaatgccttcctcgatgcc
tatgcccaaagccggcgggacgatgtgacgaacgtcgtctccatcgcctggagccgctgg
caggacgtgggaatggcagccgatcttgccgaacaggccgccacagaccgggccaccgcg
ccgctgggggcaggcgaggctatggaccatccgttcctgcacgccatgcaccggctatcg
ccatccgaagtgatcgccgagggcacgctttcgcccgatcaccactggttgctggacgag
cacaggctagcggacggaagcgccctcatccccggcaccggctttctcgaactggcgcgt
gccgctttcgacagccttgaggctggaccgagcgaactggccgacatcctgtttttggct
cccttcgcggtacccgatggcgagagccggaccttgcgcatccacatgcaccaggagcgc
gacggcgactggcatttcgccatcctcggccgcgccgcgaacggcgccgccgatcaaggc
tggaccgaacatgttcgtggtacggtccgccgcctcgcggccgcgcccatagcgccgcag
gacgtgcctgcactgctgcaacgcatgccggctcagggtaatgccgaagcactggtcgat
gcatcatcgatgatgcggttcgggccgcgctggcggtcggtccggcaattgcgcatcgct
gatggcgaggccgtattggaactggcgcttgaccggcggttcgcccacgatcttgcgcat
atcgcgctgcatccagccctgctagatttcgccacggcgggtgcgcagtgcctgatccca
gggcgccggccgggccaggatttcttcgcgcctgcctcctacggcgcgatcaaactttat
cacgcctgccccgcccatttgttcagccatgtccgctgccgccctgcgacgagcgatgcc
attgccgtgttcgacgtgacgctgctcgacccgcaaggccgggtgatcgccgagattgcc
gaattcacgatgctgcgtctttcggactccgcccggctttccggcgctgaaactccggct
ccgcgcgcggcaagcaagccgcttcccgtggagccggcgagtgacggtctggtttccgcc
gaaggcgtggccatcgtggagcgcatcctggcgggcgtgccagccagccatgtcatcatc
tcgcccaccgacctgcaccagacgctggaccggatccgcgcgccctataagccggcagcg
acattcgagcgggacgacgaagcccctggaggcgatcccccggcgaccgctgccgagcgc
atcatcgctgaaatctggagcgagatgctgggcgtaaggcacatccagcgcagcgacgac
ttcttcgaccttggcggccactcgctgctgggcgtccaattcatgaaccgcctgcgcaag
cggaccggcaagcaactgccgctggcaacattgctggaaagcacgacggtagagaaactg
ggccgcctgatcgatcccgaaggcgccgccgccgtcggctcaagcgaagcgccggaggag
gagggcgccgccaaccgcaagatcatcacaattcgtcccggcagccggaaaactccgctg
ttcctggtccacgacggtcttggcgaaacgctgctctaccgtgcgctggcgatgcggatg
gaccccgaccgcccggttatgggcatcgagccggacgtctatgctggcggcgcctacctg
cacaccagcataaccgagatggccagcgcctatatcgtgcggatgcagacggtgcagccg
catggcccctaccttatcgccgggctttgtgcgggcggcgtcatcgccttcgagatggcc
cggcagttgcaggacatgggcgaaactactgcatttgtaggcatcgtcgatgccgcggat
gtcgaggcgcacaagcgctcgttctacatcacccgtacccgcatccagcgcgtccgcgca
ctgctgcgcggcgatgccggcgggccgccgcccagtgtcggcctgctgatgcgccgcgcg
gccaacgccgtcgtctacgacgtatcgacccgcctcgaatggatgagccgtacgcgcaag
gtcgcccgcatggccgaaggaccaagcgcggcgaacgacgacgtgcaggtcgctgccccc
aagctgtcgttcctgcacctttacgaagtggctcaccgggcgcaccgtccgggcgggctg
ttcgaaggcggcgaagtggtcctgttcaaggccatgcagggcaccggcgccgacgacgat
gttccttattccgatctctataccgactgcatctttggctggggcaagcgggtcgagggc
gacgtaacggtcgtctctgtgccgggcggtcacagcagcgtcctgcaggaacccaacgtg
gacgtactggctggtgcgatgcgcgaggctatcgcccgcgcccggccgggcgaagatgtg
gtgcaggaaccgatcccgatcatgcctgcggcttcggctcctgtggatttcgggcgcagg
ccagagacggcccagttgcaagtccagtga
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