Novosphingobium sp. P6W: TQ38_025835
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Entry
TQ38_025835 CDS
T05550
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
nov
Novosphingobium sp. P6W
Pathway
nov03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
TQ38_025835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nov03400
]
TQ38_025835
DNA repair and recombination proteins [BR:
nov03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
TQ38_025835
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GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AXB80040
UniProt:
A0A2Z5EKN8
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All DBs
Position
pP6W1:13222..14142
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AA seq
306 aa
AA seq
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MAARPYWKGQIRLALVSIPIEIYSATKSGATIAFNQIHEPSGQRIKYEKVVPGIGPVDVD
EIVKGFEYAKGEYVLLDEKEIEGVKLESKKTLELTQFVDAHDVDMIYFEKPYYVVPADDL
AEEAFIVLREALRRTRKIGLGQLAMRGREYVVSIKACGRGMVMETLRYADEVNKATSYFR
EIGDADPDEELLDLATTLIDKKTGKFDASDFHDRYADALKELIERKKKGKTLNIDADDKG
ADPRGSNVVDLMAALKSSLGGSASSKPAAKKRAPKTEQQAGKTAKPAAKKTVAKPPAKSP
PRKRAS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacgtccctattggaaaggccagatccgcctggcgctcgtttcgatccccatc
gaaatctattcggcaaccaaaagcggtgcgacgatcgccttcaatcagattcatgaaccg
tccggccagcgcatcaaatatgaaaaggtcgtgccagggatcgggccggttgacgtcgac
gagattgtcaaaggcttcgaatatgccaaaggcgaatatgtgctccttgatgaaaaggaa
atcgagggggtcaagctcgagagcaagaagacgcttgagttaacgcagttcgtcgacgct
cacgatgtcgacatgatctatttcgaaaagccctattacgtagtgccggctgacgatctg
gccgaagaggcgttcatcgtgctgcgtgaagcgctgagacgcacccgcaagatcgggctc
gggcaacttgcaatgcgcggccgcgaatacgtcgtcagtatcaaggcttgcggccgcggg
atggtcatggaaacgctgcgctacgccgacgaggtcaacaaggcgacaagctacttccga
gaaattggggacgccgatcctgacgaggagctgctcgatcttgcgacaacgttgatcgac
aaaaagaccggcaagttcgatgcaagcgatttccacgaccgctatgccgatgcgctgaag
gagctgatcgaacgcaagaaaaagggcaagacgcttaatattgatgcggacgacaaaggc
gctgatccgcgtggttcgaacgttgtcgatctgatggcggcactcaagagttctctggga
gggtccgcttcgtccaagccagcggccaagaaacgggcgcctaagactgaacaacaggcc
ggaaaaacggccaaaccggcagccaaaaagaccgtcgcaaaacccccggcgaagtcaccg
ccccgcaagcgagcttcatga
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