Novosphingobium sp. P6W: TQ38_026825
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Entry
TQ38_026825 CDS
T05550
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
nov
Novosphingobium sp. P6W
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nov02000
]
TQ38_026825
Transporters [BR:
nov02000
]
Other transporters
Pores ion channels [TC:
1
]
TQ38_026825
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AXB80208
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All DBs
Position
pP6W1:complement(231975..233930)
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AA seq
651 aa
AA seq
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MRNRFNPGALCVSLAALCAATPALAQSNPSVASENAQGEQIVVTGTRSGEGVAVRDLPAS
ITVISDADLQERQTRIVSDVLRDVPGVAVSRTGAIGGLTQIRIRGTEGNHVLVLIDGIEA
ADPYNGEYDFGTLIADPAARIEVLRGQQSSLYGSDAIGGVIQYITLTGREAPGVSVRAEG
GSFGTYTGSARIAGYSDTFDYAVSGSLYQTDGTRTARYGTRDVGSTNAGASAKLNWAPSE
AFKLTGVARYSYTDADTNDSEDDPTSPLFGYTVDSPGVHYRNEAIYALVRGELSLADGRW
ITAMTGQIADTERKGYNEDGFDYGDKGTRYKGSLESSYRFGSDHIVHRLTGAVDFEREEF
RNTTPSAFVFQGKRSTENLGLVGQYELTVDDALQLGASVRYDDNNRFDDVTTWRAQAGYR
LPFGLRLRGAFGTGVKNPGYYELYGYSDGEYIGNPNLKPEKSEGWEAGVDQIIAGGLATI
GATYFDSRLKDEIYTTYPAPDFIATPSNRATKSRQKGVEVFLSAQPIEQIKFDLAYTYLN
SKENDVTEVRRPRHVGSVNATVFSNDKRFAGTLTMRYNGRQTDVAYTDPSYVPVRVSLKE
YVLVNFNADYKVTESISVFGRVENLTNEDYEEVFSFATPGRAVYGGLKAKF
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacagattcaatccgggcgcgctgtgcgtctcgctcgcagcgttgtgcgcggcc
acgcccgcgctcgcgcagagcaacccgtcggtggcatccgagaacgcgcaaggcgaacag
atcgtcgtcaccggcacccgctcgggcgagggcgtcgcggtcagggacctgcccgcatcg
atcaccgtcatcagcgacgccgacctgcaggagcgccagacccgcatcgtctccgacgtg
ctgcgtgacgtccccggcgtcgcggtcagccgcaccggcgccatcggggggcttacccag
atccgcatccgcggcaccgaaggcaaccacgtactcgtgctgatcgacggcatcgaagcg
gccgacccctataatggcgaatacgacttcgggaccctgatcgccgatcccgcggcgcgc
atcgaagtcctgcgcgggcagcagtcctcgctctacggctcggatgccatcggcggcgtt
atccagtacatcaccctgaccggccgcgaggcgccgggcgtcagcgtgcgggccgagggc
ggatcgttcggcacctacaccggcagcgcacgcatcgccgggtacagcgacacgttcgac
tacgccgtctcgggctcgctctaccagaccgacggcacgcgcaccgcccgctacggcacg
cgcgacgtcggctcgaccaatgccggcgccagcgccaagctgaactgggccccgtccgaa
gcgttcaagctgaccggcgtcgcccgctacagctataccgacgccgataccaacgacagc
gaggacgatcccaccagcccgctgttcggctacaccgtcgacagtcccggcgttcattac
aggaacgaggcgatctacgcgctcgtacggggggaactgtcactggcggacgggcgctgg
atcaccgccatgaccggccagatcgccgacaccgagcgcaagggctacaacgaggacggc
ttcgactacggcgacaagggcacgcgttacaagggctcgctcgagagcagctaccgcttc
ggcagcgaccacatcgtccaccgcctgaccggggccgtcgatttcgagcgtgaggagttc
cggaataccacgccctcggccttcgtgttccagggcaagcgctcgaccgagaacctgggc
ctcgtcggccagtacgaactgaccgtggacgacgccctgcagcttggggcaagcgtccgc
tacgatgacaacaaccgcttcgacgacgtcaccacctggcgcgcccaggccggctatcgc
ctgcccttcgggctacgcctgcgcggcgcctttggcaccggcgtcaagaaccccgggtat
tacgaactctatggctactcggacggcgaatatatcggcaatccgaacctcaagcccgag
aagtccgagggttgggaagcgggcgtcgaccagatcatcgcgggcgggctcgcgacgatc
ggcgcgacctacttcgattccaggctgaaggacgagatctacacgacctatcccgctccg
gacttcatcgccacgccgagcaaccgcgccaccaagtcgcggcagaagggcgtcgaggtg
ttcctctccgcccagccgatcgagcagatcaagttcgacctcgcctatacctacctgaac
tccaaggaaaacgacgtcaccgaagtgcgccgcccccggcacgtcggcagcgtcaacgcg
actgtgttcagcaatgacaagcgcttcgccggcaccctgacgatgcggtacaacggacgc
cagaccgacgtggcctataccgaccccagctacgtgccggtgcgggtgagcctcaaggaa
tacgtcctcgtcaactttaatgccgactacaaggtgaccgaaagcatctcggtgttcggc
cgggtagagaacctgacgaacgaggactacgaggaagtcttcagcttcgcgacgccgggc
cgcgccgtctacggcgggctcaaggcaaagttctga
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